G349857


Basic Information

Item Value
gene id G349857
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38407107 ~ 38407307 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU395888
agagggacgagaggagagagggacgagaggagagagggatgagaggagagagggacgagaggagagggacgagaggagagagggatgagaggagagagggacgagaggagagagggacgagaggagagagggacgagaggagagagggatgagaggagagagggacgagaggagagagggacgagaggagagagggacgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395888 True 201 lncRNA 0.61 1 38407107 38407307

Neighbor

gene id symbol gene type direction distance location
LOC110522580 LOC106608254 coding upstream 115569 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 172429 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 507899 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 509583 37879402 ~ 37897524 (+)
actc1a LOC105024319 coding upstream 528589 37870752 ~ 37878518 (+)
thbs1b LOC106608163 coding downstream 218909 38626216 ~ 38651062 (+)
LOC110522590 NA coding downstream 410593 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 418476 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 483007 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 492097 38898435 ~ 38900534 (+)
G349856 NA non-coding upstream 772 38406120 ~ 38406335 (+)
G349533 NA non-coding upstream 42713 38363369 ~ 38364394 (+)
G349531 NA non-coding upstream 44080 38354868 ~ 38363027 (+)
G349528 NA non-coding upstream 44962 38352696 ~ 38362145 (+)
G349858 NA non-coding downstream 1083 38408390 ~ 38408944 (+)
G349861 NA non-coding downstream 6059 38413366 ~ 38413583 (+)
G349866 NA non-coding downstream 9846 38417153 ~ 38417407 (+)
G349881 NA non-coding downstream 29665 38436972 ~ 38438213 (+)
G349915 NA non-coding downstream 75715 38483022 ~ 38483314 (+)
G349855 NA other upstream 1643 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 910101 37445368 ~ 37501952 (+)
G348133 NA other upstream 1245984 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2334151 36039096 ~ 36123362 (+)
G347178 NA other upstream 2498656 35908246 ~ 35908451 (+)
G349877 NA other downstream 24872 38432179 ~ 38434024 (+)
G350211 NA other downstream 496423 38903730 ~ 38904774 (+)
G350665 NA other downstream 980834 39388141 ~ 39389474 (+)
G351441 NA other downstream 1727380 40134687 ~ 40136773 (+)

Expression


Co-expression Network