G349861


Basic Information

Item Value
gene id G349861
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38413366 ~ 38413583 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU395892
actcacagaacatcctccctgtctaactaactaactcacagaacatcctccctgtctaactaactaactcacagaacatcctccctgtctaactaactaactcacagAACACCCTCCCTGTCTAACTAACTAACCCACAGAACACCCTCCCTGTCTAACTAACTAACCCACAGAATTCCCTCCCcgtctaactaactaactaacccacAGAACACCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395892 True 218 lncRNA 0.45 1 38413366 38413583

Neighbor

gene id symbol gene type direction distance location
LOC110522580 LOC106608254 coding upstream 121828 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 178688 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 514158 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 515842 37879402 ~ 37897524 (+)
actc1a LOC105024319 coding upstream 534848 37870752 ~ 37878518 (+)
thbs1b LOC106608163 coding downstream 212633 38626216 ~ 38651062 (+)
LOC110522590 NA coding downstream 404317 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 412200 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 476731 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 485821 38898435 ~ 38900534 (+)
G349858 NA non-coding upstream 4422 38408390 ~ 38408944 (+)
G349857 NA non-coding upstream 6059 38407107 ~ 38407307 (+)
G349856 NA non-coding upstream 7031 38406120 ~ 38406335 (+)
G349533 NA non-coding upstream 48972 38363369 ~ 38364394 (+)
G349531 NA non-coding upstream 50339 38354868 ~ 38363027 (+)
G349866 NA non-coding downstream 3570 38417153 ~ 38417407 (+)
G349881 NA non-coding downstream 23389 38436972 ~ 38438213 (+)
G349915 NA non-coding downstream 69439 38483022 ~ 38483314 (+)
G349918 NA non-coding downstream 72644 38486227 ~ 38486503 (+)
G349919 NA non-coding downstream 73599 38487182 ~ 38487568 (+)
G349855 NA other upstream 7902 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 916360 37445368 ~ 37501952 (+)
G348133 NA other upstream 1252243 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2340410 36039096 ~ 36123362 (+)
G347178 NA other upstream 2504915 35908246 ~ 35908451 (+)
G349877 NA other downstream 18596 38432179 ~ 38434024 (+)
G350211 NA other downstream 490147 38903730 ~ 38904774 (+)
G350665 NA other downstream 974558 39388141 ~ 39389474 (+)
G351441 NA other downstream 1721104 40134687 ~ 40136773 (+)

Expression


Co-expression Network