G349877


Basic Information

Item Value
gene id G349877
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38432179 ~ 38434024 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU395908
tccATATAGTGTGATGTTAAACAGACCCCTTTTGGCCAtcgtcaaaagttgtgcactaattcacttcaaattgtatttgtcacatgcgctgaatacaacaggtgtagtagaccttacagtgacatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgacatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgacatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgacatgctgaatacaacaggtgtagtagaccttacagtgacatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgacatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgacatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgattacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgacatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgacatgctgaaaacaacaggtgtaggtagaccttacagtgaaatgctgaaaacaacaggtgtaggtagaccttacagtgacatgctgaaaacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgacatgctgaaaacaacaggtgtaggtagaccttacagtgacatgctgaaaacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgacatgctgaaaacaacaggtgtaggt

Function

NR:

description
uncharacterized protein LOC110520745

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395908 True 1614 TUCP 0.41 3 38432179 38434024

Neighbor

gene id symbol gene type direction distance location
LOC110522580 LOC106608254 coding upstream 140641 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 197501 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 532971 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 534655 37879402 ~ 37897524 (+)
actc1a LOC105024319 coding upstream 553661 37870752 ~ 37878518 (+)
thbs1b LOC106608163 coding downstream 192192 38626216 ~ 38651062 (+)
LOC110522590 NA coding downstream 383876 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 391759 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 456290 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 465380 38898435 ~ 38900534 (+)
G349866 NA non-coding upstream 14772 38417153 ~ 38417407 (+)
G349861 NA non-coding upstream 18596 38413366 ~ 38413583 (+)
G349858 NA non-coding upstream 23235 38408390 ~ 38408944 (+)
G349857 NA non-coding upstream 24872 38407107 ~ 38407307 (+)
G349856 NA non-coding upstream 25844 38406120 ~ 38406335 (+)
G349881 NA non-coding downstream 2948 38436972 ~ 38438213 (+)
G349915 NA non-coding downstream 48998 38483022 ~ 38483314 (+)
G349918 NA non-coding downstream 52203 38486227 ~ 38486503 (+)
G349919 NA non-coding downstream 53158 38487182 ~ 38487568 (+)
G349943 NA non-coding downstream 107827 38541851 ~ 38542071 (+)
G349855 NA other upstream 26715 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 935173 37445368 ~ 37501952 (+)
G348133 NA other upstream 1271056 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2359223 36039096 ~ 36123362 (+)
G347178 NA other upstream 2523728 35908246 ~ 35908451 (+)
G350211 NA other downstream 469706 38903730 ~ 38904774 (+)
G350665 NA other downstream 954117 39388141 ~ 39389474 (+)
G351441 NA other downstream 1700663 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 2556135 40990159 ~ 40990505 (+)

Expression


Co-expression Network