G349881


Basic Information

Item Value
gene id G349881
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38436972 ~ 38438213 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU395915
AATCAATACAAATCATTACCAATCAATACCAATCAATACAAATCATTACCAATCAATACCAATCAATACCAATCAATACAAATCATTACCAATCAATACCAATCAATACCAATCAATACAAATCATGACCAATCATTACCAATCAATACAAATCATTACCAATCATTACCAATCAATACCAATCATTACCAATCATTACCAATCATTACCAATCAATACAAATAATTACCAATCATTGCCAATCAATACC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107395943

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395915 True 250 lncRNA 0.28 2 38436972 38438213

Neighbor

gene id symbol gene type direction distance location
LOC110522580 LOC106608254 coding upstream 145434 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 202294 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 537764 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 539448 37879402 ~ 37897524 (+)
actc1a LOC105024319 coding upstream 558454 37870752 ~ 37878518 (+)
thbs1b LOC106608163 coding downstream 188003 38626216 ~ 38651062 (+)
LOC110522590 NA coding downstream 379687 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 387570 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 452101 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 461191 38898435 ~ 38900534 (+)
G349866 NA non-coding upstream 19565 38417153 ~ 38417407 (+)
G349861 NA non-coding upstream 23389 38413366 ~ 38413583 (+)
G349858 NA non-coding upstream 28028 38408390 ~ 38408944 (+)
G349857 NA non-coding upstream 29665 38407107 ~ 38407307 (+)
G349856 NA non-coding upstream 30637 38406120 ~ 38406335 (+)
G349915 NA non-coding downstream 44809 38483022 ~ 38483314 (+)
G349918 NA non-coding downstream 48014 38486227 ~ 38486503 (+)
G349919 NA non-coding downstream 48969 38487182 ~ 38487568 (+)
G349943 NA non-coding downstream 103638 38541851 ~ 38542071 (+)
G349945 NA non-coding downstream 107235 38545448 ~ 38545684 (+)
G349877 NA other upstream 2948 38432179 ~ 38434024 (+)
G349855 NA other upstream 31508 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 939966 37445368 ~ 37501952 (+)
G348133 NA other upstream 1275849 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2364016 36039096 ~ 36123362 (+)
G350211 NA other downstream 465517 38903730 ~ 38904774 (+)
G350665 NA other downstream 949928 39388141 ~ 39389474 (+)
G351441 NA other downstream 1696474 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 2551946 40990159 ~ 40990505 (+)

Expression


Co-expression Network