G349918


Basic Information

Item Value
gene id G349918
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38486227 ~ 38486503 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU395952
CCTGTCCATCCTGTCAGTACGTGTCTGTAGTTATAGAGTCCCCATCACTGCCTGTCCATCCTGTCCACCCTGTCCATCCTGTCCACCCTGTCCATCCTGTCTATCCTGTCCACCCTGTCTATCCTGTCCATCCTGTCCATCCTGTCCATCCTGTCCACCCTGTCtatcctgtccatcctgtctgtaGTTATAGAGTCCCCATCACTGCCTATCCACCCTGTCAGTACGTGTCTGTAGTTATAGAGTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395952 True 250 lncRNA 0.53 2 38486227 38486503

Neighbor

gene id symbol gene type direction distance location
LOC110522580 LOC106608254 coding upstream 194689 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 251549 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 587019 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 588703 37879402 ~ 37897524 (+)
actc1a LOC105024319 coding upstream 607709 37870752 ~ 37878518 (+)
thbs1b LOC106608163 coding downstream 139713 38626216 ~ 38651062 (+)
LOC110522590 NA coding downstream 331397 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 339280 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 403811 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 412901 38898435 ~ 38900534 (+)
G349915 NA non-coding upstream 2913 38483022 ~ 38483314 (+)
G349881 NA non-coding upstream 48014 38436972 ~ 38438213 (+)
G349866 NA non-coding upstream 68820 38417153 ~ 38417407 (+)
G349861 NA non-coding upstream 72644 38413366 ~ 38413583 (+)
G349858 NA non-coding upstream 77283 38408390 ~ 38408944 (+)
G349919 NA non-coding downstream 679 38487182 ~ 38487568 (+)
G349943 NA non-coding downstream 55348 38541851 ~ 38542071 (+)
G349945 NA non-coding downstream 58945 38545448 ~ 38545684 (+)
G349958 NA non-coding downstream 82098 38568601 ~ 38568814 (+)
G349960 NA non-coding downstream 84766 38571269 ~ 38571500 (+)
G349877 NA other upstream 52203 38432179 ~ 38434024 (+)
G349855 NA other upstream 80763 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 989221 37445368 ~ 37501952 (+)
G348133 NA other upstream 1325104 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2413271 36039096 ~ 36123362 (+)
G350211 NA other downstream 417227 38903730 ~ 38904774 (+)
G350665 NA other downstream 901638 39388141 ~ 39389474 (+)
G351441 NA other downstream 1648184 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 2503656 40990159 ~ 40990505 (+)

Expression


Co-expression Network