G350186


Basic Information

Item Value
gene id G350186
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38732947 ~ 38733170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396246
GTTTAAGACTAAAGGCTTTTTGCACGTCTAGGAGAGAAGCCGATTCACATGGGAAGCAGTATGTTCCACTCCACAACCCTCTCCACCAGTGAGTGTGTGGTAGCAGTGTTTTTTCCCCCTACACCCCCCTCTGCTCAAACATCAGGTACATTGTTATGGTCCAAGTTATTGCCTGCTAAGGAGAATCTGGACAAGTCAACCATCAGTTCTACTCAGGTCACCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU396246 True 224 lncRNA 0.48 1 38732947 38733170

Neighbor

gene id symbol gene type direction distance location
thbs1b LOC106608163 coding upstream 81885 38626216 ~ 38651062 (+)
LOC110522580 LOC106608254 coding upstream 441409 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 498269 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 833739 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 835423 37879402 ~ 37897524 (+)
LOC110522590 NA coding downstream 84730 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 92613 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 157144 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 166234 38898435 ~ 38900534 (+)
LOC110522592 LOC106608157 coding downstream 188168 38921338 ~ 38942012 (+)
G349999 NA non-coding upstream 60301 38672444 ~ 38672646 (+)
G349989 NA non-coding upstream 87488 38643985 ~ 38645459 (+)
G349960 NA non-coding upstream 161447 38571269 ~ 38571500 (+)
G349958 NA non-coding upstream 164133 38568601 ~ 38568814 (+)
G349945 NA non-coding upstream 187263 38545448 ~ 38545684 (+)
G350193 NA non-coding downstream 7517 38740687 ~ 38740898 (+)
G350213 NA non-coding downstream 27248 38760418 ~ 38763806 (+)
G350219 NA non-coding downstream 30757 38763927 ~ 38764322 (+)
G350221 NA non-coding downstream 33994 38767164 ~ 38767380 (+)
G350225 NA non-coding downstream 48704 38781874 ~ 38782902 (+)
G349877 NA other upstream 298923 38432179 ~ 38434024 (+)
G349855 NA other upstream 327483 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1235941 37445368 ~ 37501952 (+)
G348133 NA other upstream 1571824 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2659991 36039096 ~ 36123362 (+)
G350211 NA other downstream 170560 38903730 ~ 38904774 (+)
G350665 NA other downstream 654971 39388141 ~ 39389474 (+)
G351441 NA other downstream 1401517 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 2256989 40990159 ~ 40990505 (+)

Expression


Co-expression Network