G350225


Basic Information

Item Value
gene id G350225
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38781874 ~ 38782902 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396304
TCTCAATGCAATAGACTGTACATTAATATCCATCATCATTCACACTGCTGGTCTGTTACATTAATATCCTTCATCATTCACACTGCTGGTCTGTTACATTAATATCCTTCATCATTCATACTGCTGGTCTGTTACATTAATATCCTTCATCATTCACACTGCTGGTCTGTTACATTAATATCCTTCATCATTCACACTGCTGGTCTGTTCCATTAATATCCTTCATCATTCACACTGCTGGTCTGTTGTATTAATATCCTTCATCATTCACACTGCTGGTCTGATACATTAATATCCTTCATTCACACTGCTGGTCTGTTCCATTAATATCCTTCATCATTCACACTGCTGGTCTGTTACATTAATATCCTTCATCATTCACACTGCTGGTCTGCTACATTAATATCCTTCATCATTCACACTGCTGGTTTGTTACATTAATATCCTTCATCATTCACACTGCTGGTCTGTTACATTAATATCCTTCATCATTCACACTGCTGGTCTGTTACATTAATATCCTTCATCATTCACACTGCTGGTCTGTTACATTAATATCCTTCATCATTCACACTGCTGGTCTGATACATTAATATCCTTCATCATTCACACTGCTGGTCTGTTACATTAATATCCTTCATCATTCACACTGCTGGTCTGTTACATTAATATCCTTCATCATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU396304 True 684 lncRNA 0.37 3 38781874 38782902

Neighbor

gene id symbol gene type direction distance location
thbs1b LOC106608163 coding upstream 130812 38626216 ~ 38651062 (+)
LOC110522580 LOC106608254 coding upstream 490336 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 547196 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 882666 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 884350 37879402 ~ 37897524 (+)
LOC110522590 NA coding downstream 34998 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 42881 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 107412 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 116502 38898435 ~ 38900534 (+)
LOC110522592 LOC106608157 coding downstream 138436 38921338 ~ 38942012 (+)
G350221 NA non-coding upstream 14494 38767164 ~ 38767380 (+)
G350219 NA non-coding upstream 17552 38763927 ~ 38764322 (+)
G350213 NA non-coding upstream 18068 38760418 ~ 38763806 (+)
G350193 NA non-coding upstream 40976 38740687 ~ 38740898 (+)
G350186 NA non-coding upstream 48704 38732947 ~ 38733170 (+)
G350232 NA non-coding downstream 22818 38805720 ~ 38806230 (+)
G350206 NA non-coding downstream 26028 38808930 ~ 38809369 (+)
G350210 NA non-coding downstream 33445 38816347 ~ 38817388 (+)
G350244 NA non-coding downstream 79571 38862473 ~ 38862866 (+)
G349877 NA other upstream 347850 38432179 ~ 38434024 (+)
G349855 NA other upstream 376410 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1284868 37445368 ~ 37501952 (+)
G348133 NA other upstream 1620751 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2708918 36039096 ~ 36123362 (+)
G350211 NA other downstream 120828 38903730 ~ 38904774 (+)
G350665 NA other downstream 605239 39388141 ~ 39389474 (+)
G351441 NA other downstream 1351785 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 2207257 40990159 ~ 40990505 (+)

Expression


Co-expression Network