G350266


Basic Information

Item Value
gene id G350266
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38939013 ~ 38940316 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396349
acctacggaccatctcttcctgtagtatgatggagaatctaccgtacctacggaccatctctccctgtagtatgatggagaatctaccgtacctacggaccatctcttcctgtagtatgatggagaatctaccgtacctacggaccatctcttcctgtagtatgatggagaatctaccgtacctacggaccatctctccctgtagctTGTGTGTTTGTCTGCTTATGGGCCAAATGTTGACCTCTTCATTTCCCCCACCCctttctctattcc

Function

NR:

description
PREDICTED: uncharacterized PPE family protein PPE10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU396349 True 273 lncRNA 0.48 2 38939013 38940316

Neighbor

gene id symbol gene type direction distance location
LOC118964476 NA coding upstream 39137 38898435 ~ 38900534 (+)
LOC110522591 LOC105024333 coding upstream 41332 38890314 ~ 38897681 (+)
LOC118964474 LOC106608159 coding upstream 53241 38825783 ~ 38885772 (+)
LOC110522590 NA coding upstream 118489 38817900 ~ 38820524 (+)
thbs1b LOC106608163 coding upstream 287951 38626216 ~ 38651062 (+)
LOC110521104 LOC106608154 coding downstream 20219 38960535 ~ 38994558 (+)
LOC118964477 NA coding downstream 54369 38994685 ~ 38995753 (+)
LOC110521105 LOC106571085 coding downstream 95078 39035394 ~ 39190157 (+)
LOC118964499 NA coding downstream 172407 39112723 ~ 39113347 (+)
rgs6 LOC106571069 coding downstream 282395 39222711 ~ 39384500 (+)
G350260 NA non-coding upstream 26933 38911852 ~ 38912080 (+)
G350255 NA non-coding upstream 33823 38904969 ~ 38905190 (+)
G350208 NA non-coding upstream 37427 38901108 ~ 38901586 (+)
G350253 NA non-coding upstream 56589 38880676 ~ 38882424 (+)
G350270 NA non-coding downstream 15257 38955573 ~ 38993719 (+)
G350288 NA non-coding downstream 46513 38986829 ~ 38990961 (+)
G350392 NA non-coding downstream 57517 38997833 ~ 38998312 (+)
G350399 NA non-coding downstream 68248 39008564 ~ 39011033 (+)
G350400 NA non-coding downstream 68600 39008916 ~ 39010648 (+)
G350211 NA other upstream 34239 38903730 ~ 38904774 (+)
G349877 NA other upstream 504989 38432179 ~ 38434024 (+)
G349855 NA other upstream 533549 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1442007 37445368 ~ 37501952 (+)
G350665 NA other downstream 447825 39388141 ~ 39389474 (+)
G351441 NA other downstream 1194371 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 2049843 40990159 ~ 40990505 (+)
G352340 NA other downstream 2269931 41210247 ~ 41210998 (+)
G352341 NA other downstream 2270797 41211113 ~ 41214206 (+)

Expression


Co-expression Network