G350399


Basic Information

Item Value
gene id G350399
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39008564 ~ 39011033 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396536
ccagttcaatgtaacagcgataggtttaggttactgtccttcatattccattcatccagttcaatgtaacagcgataggtttaggttactgtccttcatattccattcatccagttcaatgtaacagcgataggtttaggttactgtccttcatattccattcacccagttcaatgtaacagtgataggtttaggttactgtccttcatattcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU396536 True 215 lncRNA 0.39 2 39008564 39011033

Neighbor

gene id symbol gene type direction distance location
LOC118964477 NA coding upstream 12811 38994685 ~ 38995753 (+)
LOC110521104 LOC106608154 coding upstream 14006 38960535 ~ 38994558 (+)
LOC110522592 LOC106608157 coding upstream 66552 38921338 ~ 38942012 (+)
LOC118964476 NA coding upstream 108688 38898435 ~ 38900534 (+)
LOC110522591 LOC105024333 coding upstream 110883 38890314 ~ 38897681 (+)
LOC110521105 LOC106571085 coding downstream 24361 39035394 ~ 39190157 (+)
LOC118964499 NA coding downstream 101690 39112723 ~ 39113347 (+)
rgs6 LOC106571069 coding downstream 211678 39222711 ~ 39384500 (+)
pigh pigh coding downstream 462275 39473308 ~ 39478404 (+)
vps18 LOC106608270 coding downstream 517394 39528427 ~ 39562620 (+)
G350392 NA non-coding upstream 10252 38997833 ~ 38998312 (+)
G350270 NA non-coding upstream 14845 38955573 ~ 38993719 (+)
G350288 NA non-coding upstream 17603 38986829 ~ 38990961 (+)
G350266 NA non-coding upstream 68248 38939013 ~ 38940316 (+)
G350260 NA non-coding upstream 96484 38911852 ~ 38912080 (+)
G350402 NA non-coding downstream 2209 39013242 ~ 39013443 (+)
G350407 NA non-coding downstream 5116 39016149 ~ 39016374 (+)
G350413 NA non-coding downstream 10199 39021232 ~ 39021451 (+)
G350485 NA non-coding downstream 103741 39114774 ~ 39115485 (+)
G350211 NA other upstream 103790 38903730 ~ 38904774 (+)
G349877 NA other upstream 574540 38432179 ~ 38434024 (+)
G349855 NA other upstream 603100 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1511558 37445368 ~ 37501952 (+)
G350665 NA other downstream 377108 39388141 ~ 39389474 (+)
G351441 NA other downstream 1123654 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1979126 40990159 ~ 40990505 (+)
G352340 NA other downstream 2199214 41210247 ~ 41210998 (+)
G352341 NA other downstream 2200080 41211113 ~ 41214206 (+)

Expression


Co-expression Network