Gene
RNA
| Item | Value |
|---|---|
| gene id | G350503 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 39166348 ~ 39167155 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU396667 | False | 383 | lncRNA | 0.44 | 4 | 39166348 | 39167155 |
| TU396665 | True | 305 | lncRNA | 0.44 | 2 | 39166616 | 39166979 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964499 | NA | coding | upstream | 53001 | 39112723 ~ 39113347 (+) |
| LOC118964477 | NA | coding | upstream | 170595 | 38994685 ~ 38995753 (+) |
| LOC110521104 | LOC106608154 | coding | upstream | 171790 | 38960535 ~ 38994558 (+) |
| LOC110522592 | LOC106608157 | coding | upstream | 224336 | 38921338 ~ 38942012 (+) |
| LOC118964476 | NA | coding | upstream | 266472 | 38898435 ~ 38900534 (+) |
| rgs6 | LOC106571069 | coding | downstream | 55556 | 39222711 ~ 39384500 (+) |
| pigh | pigh | coding | downstream | 306153 | 39473308 ~ 39478404 (+) |
| vps18 | LOC106608270 | coding | downstream | 361272 | 39528427 ~ 39562620 (+) |
| ino80 | ino80 | coding | downstream | 396424 | 39563579 ~ 39651706 (+) |
| syndig1l | LOC106608262 | coding | downstream | 1015222 | 40182377 ~ 40268661 (+) |
| G350502 | NA | non-coding | upstream | 832 | 39165188 ~ 39165516 (+) |
| G350498 | NA | non-coding | upstream | 16061 | 39150058 ~ 39150287 (+) |
| G350497 | NA | non-coding | upstream | 18074 | 39148039 ~ 39148274 (+) |
| G350496 | NA | non-coding | upstream | 19081 | 39146759 ~ 39147267 (+) |
| G350495 | NA | non-coding | upstream | 19674 | 39146374 ~ 39146674 (+) |
| G350505 | NA | non-coding | downstream | 5398 | 39172553 ~ 39172940 (+) |
| G350585 | NA | non-coding | downstream | 25233 | 39192388 ~ 39192642 (+) |
| G350586 | NA | non-coding | downstream | 32924 | 39200079 ~ 39200478 (+) |
| G350594 | NA | non-coding | downstream | 47757 | 39214912 ~ 39215363 (+) |
| G350211 | NA | other | upstream | 261574 | 38903730 ~ 38904774 (+) |
| LOC110522591 | LOC105024333 | other | upstream | 268692 | 38890314 ~ 38897681 (+) |
| G349877 | NA | other | upstream | 732324 | 38432179 ~ 38434024 (+) |
| G349855 | NA | other | upstream | 760884 | 38404645 ~ 38405464 (+) |
| LOC110522576 | LOC106608246 | other | upstream | 1669342 | 37445368 ~ 37501952 (+) |
| G350665 | NA | other | downstream | 220986 | 39388141 ~ 39389474 (+) |
| G351441 | NA | other | downstream | 967532 | 40134687 ~ 40136773 (+) |
| G352136 | LOC106608303 | other | downstream | 1823004 | 40990159 ~ 40990505 (+) |
| G352340 | NA | other | downstream | 2043092 | 41210247 ~ 41210998 (+) |
| G352341 | NA | other | downstream | 2043958 | 41211113 ~ 41214206 (+) |
