G350505


Basic Information

Item Value
gene id G350505
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39172553 ~ 39172940 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396670
ATATTAGGTTGTAACGTTGCGGGTGAATATTCCTTAATGGATTATctttctttcccccccccccaacacatacTGCAAAAATAATCAAACTGTTAAGGAGAGCAGAGCTACAATTTTTGATTGCAAATTAAAGTTACAGATACAGCACTTTAAATCATCCTGTATGTCATAACTTTAATCCTCGTGTCATAACTTTAATCCTCATGTCATAACTTTAATCCTCATGTCATAACTTTAATCCTCGTGTCATAACTTTAATCCTCGTGTCATAACTTTAATCCTCGTGTCATAACTTTAATCCTCGTGTCATAACTTTAATCCTCGTGTCATAACTTTAATCCTCGTGTCATAACTTTAATCCTCGTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU396670 True 368 lncRNA 0.35 2 39172553 39172940

Neighbor

gene id symbol gene type direction distance location
LOC118964499 NA coding upstream 59206 39112723 ~ 39113347 (+)
LOC118964477 NA coding upstream 176800 38994685 ~ 38995753 (+)
LOC110521104 LOC106608154 coding upstream 177995 38960535 ~ 38994558 (+)
LOC110522592 LOC106608157 coding upstream 230541 38921338 ~ 38942012 (+)
LOC118964476 NA coding upstream 272677 38898435 ~ 38900534 (+)
rgs6 LOC106571069 coding downstream 49771 39222711 ~ 39384500 (+)
pigh pigh coding downstream 300368 39473308 ~ 39478404 (+)
vps18 LOC106608270 coding downstream 355487 39528427 ~ 39562620 (+)
ino80 ino80 coding downstream 390639 39563579 ~ 39651706 (+)
syndig1l LOC106608262 coding downstream 1009437 40182377 ~ 40268661 (+)
G350503 NA non-coding upstream 5398 39166348 ~ 39167155 (+)
G350502 NA non-coding upstream 7037 39165188 ~ 39165516 (+)
G350498 NA non-coding upstream 22266 39150058 ~ 39150287 (+)
G350497 NA non-coding upstream 24279 39148039 ~ 39148274 (+)
G350496 NA non-coding upstream 25286 39146759 ~ 39147267 (+)
G350585 NA non-coding downstream 19448 39192388 ~ 39192642 (+)
G350586 NA non-coding downstream 27139 39200079 ~ 39200478 (+)
G350594 NA non-coding downstream 41972 39214912 ~ 39215363 (+)
G350665 NA non-coding downstream 215201 39388141 ~ 39389474 (+)
G350211 NA other upstream 267779 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 274897 38890314 ~ 38897681 (+)
G349877 NA other upstream 738529 38432179 ~ 38434024 (+)
G349855 NA other upstream 767089 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1675547 37445368 ~ 37501952 (+)
G351441 NA other downstream 961747 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1817219 40990159 ~ 40990505 (+)
G352340 NA other downstream 2037307 41210247 ~ 41210998 (+)
G352341 NA other downstream 2038173 41211113 ~ 41214206 (+)

Expression


Co-expression Network