G350594


Basic Information

Item Value
gene id G350594
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39214912 ~ 39215363 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396782
ggtggcaataaattaataacaccaaaagcttaccttgacttggaggagttccagtgttgtgttggatagtcatagccagctagctaacatagcatccctctgttatagccagctagctaatatagcatccctctgttatagccagctagctaacatagcatccctctgttatagccagctagctaacatagcatccctctgttatagccagctagctaacatagcatccctctgttatagccagctagctaacatagcatccctctgttatagccaactagctaacataacatccctccgtttgagctgggtgtttcaGTAACGAAACTAgccagctgcatttgctagctaagtaggTGTCAAAGGAATTCAACAATTCCtatatgtgttcattaaccaattcaatttaaatcactctgtctgtttctaagaatttgtaagatccttatttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU396782 True 452 lncRNA 0.41 1 39214912 39215363

Neighbor

gene id symbol gene type direction distance location
LOC110521105 LOC106571085 coding upstream 28048 39035394 ~ 39190157 (+)
LOC118964499 NA coding upstream 101565 39112723 ~ 39113347 (+)
LOC118964477 NA coding upstream 219159 38994685 ~ 38995753 (+)
LOC110521104 LOC106608154 coding upstream 220354 38960535 ~ 38994558 (+)
LOC110522592 LOC106608157 coding upstream 272900 38921338 ~ 38942012 (+)
rgs6 LOC106571069 coding downstream 7348 39222711 ~ 39384500 (+)
pigh pigh coding downstream 257945 39473308 ~ 39478404 (+)
vps18 LOC106608270 coding downstream 313064 39528427 ~ 39562620 (+)
ino80 ino80 coding downstream 348216 39563579 ~ 39651706 (+)
syndig1l LOC106608262 coding downstream 967014 40182377 ~ 40268661 (+)
G350586 NA non-coding upstream 14434 39200079 ~ 39200478 (+)
G350585 NA non-coding upstream 22270 39192388 ~ 39192642 (+)
G350505 NA non-coding upstream 41972 39172553 ~ 39172940 (+)
G350503 NA non-coding upstream 47757 39166348 ~ 39167155 (+)
G350502 NA non-coding upstream 49396 39165188 ~ 39165516 (+)
G350665 NA non-coding downstream 172778 39388141 ~ 39389474 (+)
G350664 NA non-coding downstream 174240 39389603 ~ 39391386 (+)
G350674 NA non-coding downstream 196466 39411829 ~ 39412089 (+)
G350688 NA non-coding downstream 227075 39442438 ~ 39442674 (+)
G350211 NA other upstream 310138 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 317256 38890314 ~ 38897681 (+)
G349877 NA other upstream 780888 38432179 ~ 38434024 (+)
G349855 NA other upstream 809448 38404645 ~ 38405464 (+)
LOC110522576 LOC106608246 other upstream 1717906 37445368 ~ 37501952 (+)
G351441 NA other downstream 919324 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1774796 40990159 ~ 40990505 (+)
G352340 NA other downstream 1994884 41210247 ~ 41210998 (+)
G352341 NA other downstream 1995750 41211113 ~ 41214206 (+)

Expression


Co-expression Network