G350688


Basic Information

Item Value
gene id G350688
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39442438 ~ 39442674 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU396888
GTGTAGTAAAATACATTAACATGAGGTAGATTTAGATGTATATGTTGTAGAAGCATAAGTTACACATGAAGGTTTGTTTACAAAGGAAATTCAAACAAAGCAATGGCCGATGCTCTATCTAGAACGTAAACCAATCACAACTACTGTCACACTACAGACAACAAATGCATATGTTACAATGTTTAGTTCATGAGAATGATCTTAACAATTTTAGATTTCCTtttagaggagggggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU396888 True 237 lncRNA 0.34 1 39442438 39442674

Neighbor

gene id symbol gene type direction distance location
rgs6 LOC106571069 coding upstream 57938 39222711 ~ 39384500 (+)
LOC110521105 LOC106571085 coding upstream 255574 39035394 ~ 39190157 (+)
LOC118964499 NA coding upstream 329091 39112723 ~ 39113347 (+)
LOC118964477 NA coding upstream 446685 38994685 ~ 38995753 (+)
LOC110521104 LOC106608154 coding upstream 447880 38960535 ~ 38994558 (+)
pigh pigh coding downstream 30634 39473308 ~ 39478404 (+)
vps18 LOC106608270 coding downstream 85753 39528427 ~ 39562620 (+)
ino80 ino80 coding downstream 120905 39563579 ~ 39651706 (+)
syndig1l LOC106608262 coding downstream 739703 40182377 ~ 40268661 (+)
LOC118964479 NA coding downstream 868964 40311638 ~ 40312681 (+)
G350674 NA non-coding upstream 30349 39411829 ~ 39412089 (+)
G350664 NA non-coding upstream 51052 39389603 ~ 39391386 (+)
G350665 NA non-coding upstream 54018 39388141 ~ 39389474 (+)
G350594 NA non-coding upstream 227075 39214912 ~ 39215363 (+)
G350708 NA non-coding downstream 32525 39475199 ~ 39475688 (+)
G350733 LOC106608271 non-coding downstream 80725 39523399 ~ 39525963 (+)
G350744 NA non-coding downstream 124281 39566955 ~ 39567609 (+)
G350763 NA non-coding downstream 182235 39624909 ~ 39625349 (+)
G350211 NA other upstream 537664 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 544782 38890314 ~ 38897681 (+)
G349877 NA other upstream 1008414 38432179 ~ 38434024 (+)
G349855 NA other upstream 1036974 38404645 ~ 38405464 (+)
G351441 NA other downstream 692013 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1547485 40990159 ~ 40990505 (+)
G352340 NA other downstream 1767573 41210247 ~ 41210998 (+)
G352341 NA other downstream 1768439 41211113 ~ 41214206 (+)
G352477 NA other downstream 1923527 41366201 ~ 41366607 (+)

Expression


Co-expression Network