Gene
RNA
| Item | Value |
|---|---|
| gene id | G350763 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 39624909 ~ 39625349 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU396978 | False | 276 | lncRNA | 0.46 | 2 | 39624909 | 39625264 |
| TU396979 | True | 293 | lncRNA | 0.48 | 2 | 39624909 | 39625349 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| vps18 | LOC106608270 | coding | upstream | 62289 | 39528427 ~ 39562620 (+) |
| pigh | pigh | coding | upstream | 146505 | 39473308 ~ 39478404 (+) |
| rgs6 | LOC106571069 | coding | upstream | 240409 | 39222711 ~ 39384500 (+) |
| LOC110521105 | LOC106571085 | coding | upstream | 438045 | 39035394 ~ 39190157 (+) |
| syndig1l | LOC106608262 | coding | downstream | 557028 | 40182377 ~ 40268661 (+) |
| LOC118964479 | NA | coding | downstream | 686289 | 40311638 ~ 40312681 (+) |
| LOC118936457 | NA | coding | downstream | 754185 | 40379534 ~ 40386303 (+) |
| LOC110522596 | LOC106591683 | coding | downstream | 766301 | 40391650 ~ 40437808 (+) |
| stmn4 | LOC106608277 | coding | downstream | 954337 | 40579686 ~ 40597389 (+) |
| G350744 | NA | non-coding | upstream | 57300 | 39566955 ~ 39567609 (+) |
| G350733 | LOC106608271 | non-coding | upstream | 98946 | 39523399 ~ 39525963 (+) |
| G350708 | NA | non-coding | upstream | 149221 | 39475199 ~ 39475688 (+) |
| G350688 | NA | non-coding | upstream | 182235 | 39442438 ~ 39442674 (+) |
| G350674 | NA | non-coding | upstream | 212820 | 39411829 ~ 39412089 (+) |
| ino80 | ino80 | non-coding | downstream | 24827 | 39563579 ~ 39651706 (+) |
| G350783 | NA | non-coding | downstream | 33114 | 39658463 ~ 39658882 (+) |
| G350788 | NA | non-coding | downstream | 36324 | 39661673 ~ 39661953 (+) |
| G350790 | NA | non-coding | downstream | 44752 | 39670101 ~ 39713265 (+) |
| G350814 | NA | non-coding | downstream | 109464 | 39734813 ~ 39735025 (+) |
| G350665 | NA | other | upstream | 235435 | 39388141 ~ 39389474 (+) |
| G350211 | NA | other | upstream | 720135 | 38903730 ~ 38904774 (+) |
| LOC110522591 | LOC105024333 | other | upstream | 727253 | 38890314 ~ 38897681 (+) |
| G349877 | NA | other | upstream | 1190885 | 38432179 ~ 38434024 (+) |
| G349855 | NA | other | upstream | 1219445 | 38404645 ~ 38405464 (+) |
| G351441 | NA | other | downstream | 509338 | 40134687 ~ 40136773 (+) |
| G352136 | LOC106608303 | other | downstream | 1364810 | 40990159 ~ 40990505 (+) |
| G352340 | NA | other | downstream | 1584898 | 41210247 ~ 41210998 (+) |
| G352341 | NA | other | downstream | 1585764 | 41211113 ~ 41214206 (+) |
| G352477 | NA | other | downstream | 1740852 | 41366201 ~ 41366607 (+) |
