G350783


Basic Information

Item Value
gene id G350783
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39658463 ~ 39658882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU397000
ggttctcccatgtccagagaggaactcttgagctctgtcagtgtgaccatcgggttcttggtcacctccctgaccaaggcccttctcccctgattgctcagtagGAAGAggcttgatggttccaaacttcttccatttaggaatgatggaggcaactgtgttcttggggaccttccatgctgcagacattttttggtaccattcTCCAGAttggtgcctcgacacaatcctgtttgggagctctacggacaattccttcgaactcatggcttttttttgctctgactgtcaactgtgggaccttatatagacaggtgtgtacctttccaaatgttgtccaatcaattgaatttaccacaggtggactccaatcaagttgaagaaacatctgaaggatgatcaatggaaacaggatgtacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU397000 True 420 lncRNA 0.47 1 39658463 39658882

Neighbor

gene id symbol gene type direction distance location
ino80 ino80 coding upstream 6757 39563579 ~ 39651706 (+)
vps18 LOC106608270 coding upstream 95843 39528427 ~ 39562620 (+)
pigh pigh coding upstream 180059 39473308 ~ 39478404 (+)
rgs6 LOC106571069 coding upstream 273963 39222711 ~ 39384500 (+)
LOC110521105 LOC106571085 coding upstream 471599 39035394 ~ 39190157 (+)
syndig1l LOC106608262 coding downstream 523495 40182377 ~ 40268661 (+)
LOC118964479 NA coding downstream 652756 40311638 ~ 40312681 (+)
LOC118936457 NA coding downstream 720652 40379534 ~ 40386303 (+)
LOC110522596 LOC106591683 coding downstream 732768 40391650 ~ 40437808 (+)
stmn4 LOC106608277 coding downstream 920804 40579686 ~ 40597389 (+)
G350763 NA non-coding upstream 33114 39624909 ~ 39625349 (+)
G350744 NA non-coding upstream 90854 39566955 ~ 39567609 (+)
G350733 LOC106608271 non-coding upstream 132500 39523399 ~ 39525963 (+)
G350708 NA non-coding upstream 182775 39475199 ~ 39475688 (+)
G350788 NA non-coding downstream 2791 39661673 ~ 39661953 (+)
G350790 NA non-coding downstream 11219 39670101 ~ 39713265 (+)
G350814 NA non-coding downstream 75931 39734813 ~ 39735025 (+)
G350815 NA non-coding downstream 79702 39738584 ~ 39739225 (+)
G350817 NA non-coding downstream 81005 39739887 ~ 39740310 (+)
G350665 NA other upstream 268989 39388141 ~ 39389474 (+)
G350211 NA other upstream 753689 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 760807 38890314 ~ 38897681 (+)
G349877 NA other upstream 1224439 38432179 ~ 38434024 (+)
G349855 NA other upstream 1252999 38404645 ~ 38405464 (+)
G351441 NA other downstream 475805 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1331277 40990159 ~ 40990505 (+)
G352340 NA other downstream 1551365 41210247 ~ 41210998 (+)
G352341 NA other downstream 1552231 41211113 ~ 41214206 (+)
G352477 NA other downstream 1707319 41366201 ~ 41366607 (+)

Expression


Co-expression Network