G350790


Basic Information

Item Value
gene id G350790
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39670101 ~ 39713265 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU397007
GTGCTCTtgtcaaaacattttattttccttATTGTTCTGTTTTGGTGGTTTGTTACTTGGCTTTTGTACTTGTTGTGTAAAACCATTGTTTTATGACTGTGTCTAAACAGAATTCCTTCAATGAGCAAGACAATATTGCCAACGGAATTTCAATCTCCATGTATGGGGGATCTCTTGAGAATATGACATGCCACATATTTAGGGTTTACGTAGAGAGATAGAACAGGAGATTGTCAGAAACCATGCTTCCTCATTCCCAACCAATGACATCAACACAAAGATCTCCCTGTTTTCCTTTAACAGAATAAATTGAGTTGATTAGGAATGTTTGTTTCCCTGTCCCGTGTTTGTGTGGCCGTTGTTTCCTGAAAAGCCCATGTTTCCACCCCGCAACGCCAGAAGAGTACAGTGCTGACCGCAAATCACAGGAGTTCCAAATGGAGTGTGttccactactatagaccagagccctattccctatctagtgcactactatagaccagagccctaattccctatctagtgcactactattgaccagagccctattccctatctagtgcactactatagaccagagcactattccctatctagtgcactactattgaccagagccctattccctatatagtgcactagtgcactactatagaccagagccctattccctatctagtgcactactatagaccagagccctattccctatctagtgcactactattgaccagagccctattccctatctagtgcactactattgaccagagccctattccctatatagtgcactagtgcactactatagaccagagccctgttccctatctagtgcactactatagatcagagccctattccctatatagtgcactactatagaccagagccctattccctatatagtacactactatagaccagagccctattccctatctagtgcactactatagaccggaggcctattccctatatagtgcactactatagaccagagccctattccctatatagtgcactactttagaccagagccctattccctatatagtgcactactttagaccagagccctattccctatgtagtgcactactatagaccagagccctattccctatatagtgcactactatagaccagagccctattccctatatagtgcactactttagaccagagccctagtccctatattgtgcactactttagaccagagctctgtggaaccctatttcctatatagtgcactactttagaccagagacctattccctatctagtgcactactatagaccagagccctattccctatttagtgcactactattgaccagagccctattccctatctagtgcactactattgaccagagtcctattccctatatagtgcactactattgaccagagccctattccctatctagtgcactactattttccggagccctattccctatctagtgcactactattgaccagagccctattccctatctagtgcactactatagaccagagccctattccctatatagtgcactactatagaccagagccctattccctatatagtgcactactatagaccagagccctattccctatatagtgcactactattgaccagagccctattccctatatagtgcactactatagaccagagccctattccctatgtagtgcactactttagaccagagccctattccctatatagtgcactactttagaccagagccctattccctatgtagtgcactactatagaccagagccctattccctatatagtgcactactatagaccagagccctattccctatatagtgcactactatagaccagagccctattccctatatagtgcactactttagaccagagccctagtccctatattgtgcactactttagaccagagctctgtggaaccctattccctatatagcgcactactttagaccagagccctattccctatatagtgcactactttagaccagagctctgtggaaccctattccctatatagtgcactactttagacctgagctctgtggaaccctattccctatatagtgcactactttagaccagagctctgtggaaccctattccctatatagtgcactactttagaccagagctctgtggaaccctattccctatatagtgcactactttagaccagagctctgtggaaccctattccctatatagtgcactactttagaccagagccctgtgcgCAatatagtgcactact

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562210, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU397007 True 2283 lncRNA 0.44 2 39670101 39713265

Neighbor

gene id symbol gene type direction distance location
ino80 ino80 coding upstream 18395 39563579 ~ 39651706 (+)
vps18 LOC106608270 coding upstream 107481 39528427 ~ 39562620 (+)
pigh pigh coding upstream 191697 39473308 ~ 39478404 (+)
rgs6 LOC106571069 coding upstream 285601 39222711 ~ 39384500 (+)
LOC118964499 NA coding upstream 556754 39112723 ~ 39113347 (+)
syndig1l LOC106608262 coding downstream 469112 40182377 ~ 40268661 (+)
LOC118964479 NA coding downstream 598373 40311638 ~ 40312681 (+)
LOC118936457 NA coding downstream 666269 40379534 ~ 40386303 (+)
LOC110522596 LOC106591683 coding downstream 678385 40391650 ~ 40437808 (+)
stmn4 LOC106608277 coding downstream 866421 40579686 ~ 40597389 (+)
G350788 NA non-coding upstream 8148 39661673 ~ 39661953 (+)
G350783 NA non-coding upstream 11219 39658463 ~ 39658882 (+)
G350763 NA non-coding upstream 44752 39624909 ~ 39625349 (+)
G350744 NA non-coding upstream 102492 39566955 ~ 39567609 (+)
G350814 NA non-coding downstream 21548 39734813 ~ 39735025 (+)
G350815 NA non-coding downstream 25319 39738584 ~ 39739225 (+)
G350817 NA non-coding downstream 26622 39739887 ~ 39740310 (+)
G350820 NA non-coding downstream 35961 39749226 ~ 39749514 (+)
G350821 NA non-coding downstream 36660 39749925 ~ 39771408 (+)
G350665 NA other upstream 280627 39388141 ~ 39389474 (+)
G350211 NA other upstream 765327 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 772445 38890314 ~ 38897681 (+)
G349877 NA other upstream 1236077 38432179 ~ 38434024 (+)
G349855 NA other upstream 1264637 38404645 ~ 38405464 (+)
G351441 NA other downstream 421422 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1276894 40990159 ~ 40990505 (+)
G352340 NA other downstream 1496982 41210247 ~ 41210998 (+)
G352341 NA other downstream 1497848 41211113 ~ 41214206 (+)
G352477 NA other downstream 1652936 41366201 ~ 41366607 (+)

Expression


Co-expression Network