G350820


Basic Information

Item Value
gene id G350820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39749226 ~ 39749514 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU397042
ccttagccaaatacatttaaactcagtttttcacaattcctgacatttaatccctagtaaaaattccctgtcttaggtcagttaggatcaccactttattttaagaatgtgaaatgtcagaataacagcagagagaatgatttatttcagcttttatttctttcatcacattcccagtgggtcagaagtttacatacactcaattagtatttgatagcattggcttttaaaatgtttaacttgggtcaaacgttttgggtagccttccataagcttcccacaataagtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU397042 True 289 lncRNA 0.34 1 39749226 39749514

Neighbor

gene id symbol gene type direction distance location
ino80 ino80 coding upstream 97520 39563579 ~ 39651706 (+)
vps18 LOC106608270 coding upstream 186606 39528427 ~ 39562620 (+)
pigh pigh coding upstream 270822 39473308 ~ 39478404 (+)
rgs6 LOC106571069 coding upstream 364726 39222711 ~ 39384500 (+)
LOC118964499 NA coding upstream 635879 39112723 ~ 39113347 (+)
syndig1l LOC106608262 coding downstream 432863 40182377 ~ 40268661 (+)
LOC118964479 NA coding downstream 562124 40311638 ~ 40312681 (+)
LOC118936457 NA coding downstream 630020 40379534 ~ 40386303 (+)
LOC110522596 LOC106591683 coding downstream 642136 40391650 ~ 40437808 (+)
stmn4 LOC106608277 coding downstream 830172 40579686 ~ 40597389 (+)
G350817 NA non-coding upstream 8916 39739887 ~ 39740310 (+)
G350815 NA non-coding upstream 10001 39738584 ~ 39739225 (+)
G350814 NA non-coding upstream 14201 39734813 ~ 39735025 (+)
G350790 NA non-coding upstream 35961 39670101 ~ 39713265 (+)
G350788 NA non-coding upstream 87273 39661673 ~ 39661953 (+)
G350821 NA non-coding downstream 411 39749925 ~ 39771408 (+)
G351101 NA non-coding downstream 59583 39809097 ~ 39874015 (+)
G351123 NA non-coding downstream 120165 39869679 ~ 39870275 (+)
G351247 NA non-coding downstream 201047 39950561 ~ 39950783 (+)
G351254 NA non-coding downstream 207198 39956712 ~ 39957154 (+)
G350665 NA other upstream 359752 39388141 ~ 39389474 (+)
G350211 NA other upstream 844452 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 851570 38890314 ~ 38897681 (+)
G349877 NA other upstream 1315202 38432179 ~ 38434024 (+)
G349855 NA other upstream 1343762 38404645 ~ 38405464 (+)
G351441 NA other downstream 385173 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1240645 40990159 ~ 40990505 (+)
G352340 NA other downstream 1460733 41210247 ~ 41210998 (+)
G352341 NA other downstream 1461599 41211113 ~ 41214206 (+)
G352477 NA other downstream 1616687 41366201 ~ 41366607 (+)

Expression


Co-expression Network