G351254


Basic Information

Item Value
gene id G351254
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39956712 ~ 39957154 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU397515
cagaatattaatgttttgttgaagaccttctttggttggtgatagaagtaccaagtcatcagcatatagcaggtatttcacctctgtgtcaaatagtgtgagtcctggggctggagattggtccaacatgtctgctaattcattgatataaatgttgaaaagatttggactcaaattgcagccttgtctcacacctcgacattgtgaaaaaaaattctgttctttggtttttgatttttattgcacacttgttttctgtgtacatacattttattaagtcatacaccttaccaccaagcccactttgtagaattttgtagaatagcccttcgtgccaaatcgaatcaaatgcttttttaaagtcaataaagcaagcaaagattttgccctcttttttttggtggacgtgtttattaattagtgtgtgtaaggtgtatatatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU397515 True 443 lncRNA 0.36 1 39956712 39957154

Neighbor

gene id symbol gene type direction distance location
ino80 ino80 coding upstream 305006 39563579 ~ 39651706 (+)
vps18 LOC106608270 coding upstream 394092 39528427 ~ 39562620 (+)
pigh pigh coding upstream 478308 39473308 ~ 39478404 (+)
rgs6 LOC106571069 coding upstream 572212 39222711 ~ 39384500 (+)
LOC118964499 NA coding upstream 843365 39112723 ~ 39113347 (+)
syndig1l LOC106608262 coding downstream 225223 40182377 ~ 40268661 (+)
LOC118964479 NA coding downstream 354484 40311638 ~ 40312681 (+)
LOC118936457 NA coding downstream 422380 40379534 ~ 40386303 (+)
LOC110522596 LOC106591683 coding downstream 434496 40391650 ~ 40437808 (+)
stmn4 LOC106608277 coding downstream 622532 40579686 ~ 40597389 (+)
G351247 NA non-coding upstream 5929 39950561 ~ 39950783 (+)
G351101 NA non-coding upstream 82697 39809097 ~ 39874015 (+)
G351123 NA non-coding upstream 86437 39869679 ~ 39870275 (+)
G350821 NA non-coding upstream 185304 39749925 ~ 39771408 (+)
G350820 NA non-coding upstream 207198 39749226 ~ 39749514 (+)
G351260 NA non-coding downstream 4089 39961243 ~ 39962298 (+)
G351289 NA non-coding downstream 26023 39983177 ~ 39983449 (+)
G351294 NA non-coding downstream 28878 39986032 ~ 39986252 (+)
G351307 NA non-coding downstream 58003 40015157 ~ 40015809 (+)
G351312 NA non-coding downstream 62985 40020139 ~ 40020393 (+)
G350665 NA other upstream 567238 39388141 ~ 39389474 (+)
G350211 NA other upstream 1051938 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 1059056 38890314 ~ 38897681 (+)
G349877 NA other upstream 1522688 38432179 ~ 38434024 (+)
G349855 NA other upstream 1551248 38404645 ~ 38405464 (+)
G351441 NA other downstream 177533 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1033005 40990159 ~ 40990505 (+)
G352340 NA other downstream 1253093 41210247 ~ 41210998 (+)
G352341 NA other downstream 1253959 41211113 ~ 41214206 (+)
G352477 NA other downstream 1409047 41366201 ~ 41366607 (+)

Expression


Co-expression Network