G351294


Basic Information

Item Value
gene id G351294
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 39986032 ~ 39986252 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU397558
gttacagacagaggtGGTATCAGATCTACCTGTtcccctgttacagacagaggtGGTATCAGATCTATATGTtcccctgttacagacagaggtGGTATCAGATCTAACTGTGCTGTTCCACTCTTACAGAGGCCCTAAGAGGTAAAATAGTTAGCTTGCCGAAAGATGTACAAAATATTGGAAAGACTGTCTCTGTGAAATGATGTGCAattagtgtgtat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU397558 True 221 lncRNA 0.42 1 39986032 39986252

Neighbor

gene id symbol gene type direction distance location
ino80 ino80 coding upstream 334326 39563579 ~ 39651706 (+)
vps18 LOC106608270 coding upstream 423412 39528427 ~ 39562620 (+)
pigh pigh coding upstream 507628 39473308 ~ 39478404 (+)
rgs6 LOC106571069 coding upstream 601532 39222711 ~ 39384500 (+)
LOC118964499 NA coding upstream 872685 39112723 ~ 39113347 (+)
syndig1l LOC106608262 coding downstream 196125 40182377 ~ 40268661 (+)
LOC118964479 NA coding downstream 325386 40311638 ~ 40312681 (+)
LOC118936457 NA coding downstream 393282 40379534 ~ 40386303 (+)
LOC110522596 LOC106591683 coding downstream 405398 40391650 ~ 40437808 (+)
stmn4 LOC106608277 coding downstream 593434 40579686 ~ 40597389 (+)
G351289 NA non-coding upstream 2583 39983177 ~ 39983449 (+)
G351260 NA non-coding upstream 23734 39961243 ~ 39962298 (+)
G351254 NA non-coding upstream 28878 39956712 ~ 39957154 (+)
G351247 NA non-coding upstream 35249 39950561 ~ 39950783 (+)
G351101 NA non-coding upstream 112017 39809097 ~ 39874015 (+)
G351307 NA non-coding downstream 28905 40015157 ~ 40015809 (+)
G351312 NA non-coding downstream 33887 40020139 ~ 40020393 (+)
G351322 NA non-coding downstream 40365 40026617 ~ 40026818 (+)
G351418 NA non-coding downstream 124001 40110253 ~ 40110482 (+)
G351451 NA non-coding downstream 165196 40151448 ~ 40151827 (+)
G350665 NA other upstream 596558 39388141 ~ 39389474 (+)
G350211 NA other upstream 1081258 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 1088376 38890314 ~ 38897681 (+)
G349877 NA other upstream 1552008 38432179 ~ 38434024 (+)
G349855 NA other upstream 1580568 38404645 ~ 38405464 (+)
G351441 NA other downstream 148435 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 1003907 40990159 ~ 40990505 (+)
G352340 NA other downstream 1223995 41210247 ~ 41210998 (+)
G352341 NA other downstream 1224861 41211113 ~ 41214206 (+)
G352477 NA other downstream 1379949 41366201 ~ 41366607 (+)

Expression


Co-expression Network