G351307


Basic Information

Item Value
gene id G351307
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 40015157 ~ 40015809 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU397571
aaacatggtgaagccccagaattgccctcgctagaagcatgtgtttcagacataaggaagtggatggctgcaaacgttctacttttaaactcggacaaaacagagatgcttgttctaggtcccaagaaacaaagagatcttctgttgaatctgacaattaatcttgatggttgtacagtcgtctcaaataaaactgtgaaggacctcggcgttactctggaccctgatctctcttttgaagaacatatcaagaccatttcaaggacagctttttttccatctacgtaacattgcaaaaatcagaaactttctgtccaaaaattatgcagaaaaattaatccatgcttttgtcacttctaggttagactactgcaatgctctactttccggctacccggataaagcactaaataaacttcagttagtgctaaatatggctgctagaatcctgactagaaccaaaaaatttgatcatattactccagtgctagcctccctacactggcttcctgttaaggcaagggctgatttcaaggttttactgctaacctacaaagcattacatgggctttctcctacctatctctctgatttggtcctgccgtacatacctacacatacgctacggtcacaagacgcaggcctccgaattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU397571 True 653 lncRNA 0.42 1 40015157 40015809

Neighbor

gene id symbol gene type direction distance location
ino80 ino80 coding upstream 363451 39563579 ~ 39651706 (+)
vps18 LOC106608270 coding upstream 452537 39528427 ~ 39562620 (+)
pigh pigh coding upstream 536753 39473308 ~ 39478404 (+)
rgs6 LOC106571069 coding upstream 630657 39222711 ~ 39384500 (+)
LOC118964499 NA coding upstream 901810 39112723 ~ 39113347 (+)
syndig1l LOC106608262 coding downstream 166568 40182377 ~ 40268661 (+)
LOC118964479 NA coding downstream 295829 40311638 ~ 40312681 (+)
LOC118936457 NA coding downstream 363725 40379534 ~ 40386303 (+)
LOC110522596 LOC106591683 coding downstream 375841 40391650 ~ 40437808 (+)
stmn4 LOC106608277 coding downstream 563877 40579686 ~ 40597389 (+)
G351294 NA non-coding upstream 28905 39986032 ~ 39986252 (+)
G351289 NA non-coding upstream 31708 39983177 ~ 39983449 (+)
G351260 NA non-coding upstream 52859 39961243 ~ 39962298 (+)
G351254 NA non-coding upstream 58003 39956712 ~ 39957154 (+)
G351247 NA non-coding upstream 64374 39950561 ~ 39950783 (+)
G351312 NA non-coding downstream 4330 40020139 ~ 40020393 (+)
G351322 NA non-coding downstream 10808 40026617 ~ 40026818 (+)
G351418 NA non-coding downstream 94444 40110253 ~ 40110482 (+)
G351451 NA non-coding downstream 135639 40151448 ~ 40151827 (+)
G351477 NA non-coding downstream 181389 40197198 ~ 40197651 (+)
G350665 NA other upstream 625683 39388141 ~ 39389474 (+)
G350211 NA other upstream 1110383 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 1117501 38890314 ~ 38897681 (+)
G349877 NA other upstream 1581133 38432179 ~ 38434024 (+)
G349855 NA other upstream 1609693 38404645 ~ 38405464 (+)
G351441 NA other downstream 118878 40134687 ~ 40136773 (+)
G352136 LOC106608303 other downstream 974350 40990159 ~ 40990505 (+)
G352340 NA other downstream 1194438 41210247 ~ 41210998 (+)
G352341 NA other downstream 1195304 41211113 ~ 41214206 (+)
G352477 NA other downstream 1350392 41366201 ~ 41366607 (+)

Expression


Co-expression Network