Gene
RNA
| Item | Value |
|---|---|
| gene id | G351466 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 40233300 ~ 40269747 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU397736 | False | 345 | lncRNA | 0.48 | 2 | 40233300 | 40269747 |
| TU397737 | False | 341 | lncRNA | 0.48 | 2 | 40233300 | 40269747 |
| TU397739 | True | 337 | lncRNA | 0.48 | 2 | 40233300 | 40269747 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ino80 | ino80 | coding | upstream | 581594 | 39563579 ~ 39651706 (+) |
| vps18 | LOC106608270 | coding | upstream | 670680 | 39528427 ~ 39562620 (+) |
| pigh | pigh | coding | upstream | 754896 | 39473308 ~ 39478404 (+) |
| rgs6 | LOC106571069 | coding | upstream | 848800 | 39222711 ~ 39384500 (+) |
| LOC118964499 | NA | coding | upstream | 1119953 | 39112723 ~ 39113347 (+) |
| LOC118964479 | NA | coding | downstream | 41891 | 40311638 ~ 40312681 (+) |
| LOC118936457 | NA | coding | downstream | 109787 | 40379534 ~ 40386303 (+) |
| LOC110522596 | LOC106591683 | coding | downstream | 121903 | 40391650 ~ 40437808 (+) |
| stmn4 | LOC106608277 | coding | downstream | 309939 | 40579686 ~ 40597389 (+) |
| paqr8 | paqr8 | coding | downstream | 356646 | 40626393 ~ 40630821 (+) |
| G351477 | NA | non-coding | upstream | 35649 | 40197198 ~ 40197651 (+) |
| G351451 | NA | non-coding | upstream | 81473 | 40151448 ~ 40151827 (+) |
| G351418 | NA | non-coding | upstream | 122818 | 40110253 ~ 40110482 (+) |
| G351322 | NA | non-coding | upstream | 206482 | 40026617 ~ 40026818 (+) |
| G351312 | NA | non-coding | upstream | 212907 | 40020139 ~ 40020393 (+) |
| G351626 | NA | non-coding | downstream | 52633 | 40322380 ~ 40453300 (+) |
| G351643 | NA | non-coding | downstream | 90192 | 40359939 ~ 40373918 (+) |
| G351739 | NA | non-coding | downstream | 196065 | 40465812 ~ 40466209 (+) |
| G351771 | NA | non-coding | downstream | 231177 | 40500924 ~ 40501156 (+) |
| G351773 | NA | non-coding | downstream | 232485 | 40502232 ~ 40502684 (+) |
| G351441 | NA | other | upstream | 96527 | 40134687 ~ 40136773 (+) |
| G350665 | NA | other | upstream | 843826 | 39388141 ~ 39389474 (+) |
| G350211 | NA | other | upstream | 1328526 | 38903730 ~ 38904774 (+) |
| LOC110522591 | LOC105024333 | other | upstream | 1335644 | 38890314 ~ 38897681 (+) |
| G349877 | NA | other | upstream | 1799276 | 38432179 ~ 38434024 (+) |
| G352136 | LOC106608303 | other | downstream | 720412 | 40990159 ~ 40990505 (+) |
| G352340 | NA | other | downstream | 940500 | 41210247 ~ 41210998 (+) |
| G352341 | NA | other | downstream | 941366 | 41211113 ~ 41214206 (+) |
| G352477 | NA | other | downstream | 1096454 | 41366201 ~ 41366607 (+) |
| G353125 | NA | other | downstream | 1854929 | 42124676 ~ 42125759 (+) |
