G351626


Basic Information

Item Value
gene id G351626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 40322380 ~ 40453300 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU397941
aggctgagagaggctggactgagggcttgtaggcctgttgtaaggcaggtcctcaccagacatcaccggcaacaacgttgcctatgagcacaaacccaccgtcgttggaccagacaggactggcaaaaaagtgctcttcactgacgagtcgcggttttgtctcaccaggggtgatggtcggattcgcatttattgtcgaaggaatgggCGTTACACTGAGggctgtactctggagcgggatcgattcgGAGGTGGAggttccgtcatggtctggggtggtgtgtcacagcatcatcggactgagcttgttgtcatgcaggcaatctcaacgctatgcgttacaggggaagacatcctcctccctcatgtgttacccttcctgcaggctcatcctgacatgaccctccagcatgacaatgccaccagccatacagctcgttctgtgcgtgatttcctgcaagacaggaatgtccagTGTTCTGCCATTGCCAGCAAAGAGCTTGgaactcaatcccattgagcacgtctaggacctgttggatcggagggtgagggccattccccccagaaatgtctggaaacttgcaggtgccttggtggacgAGTGGGGcaatatctcacagcaagaactggcaaagtccatgagatgcactgcagttcttAATACATCTGGTGTCCACAACagatactgttacttttgaccccccctttgttctgGAACACATTccatttgttagtcacatgtttgtggaacttgttcagtttgttgtTGAATCTTTTATATTCATACACATTTTTGTACATCAAGTTTGCCGCAAATTACACAGCTGACAGCGagacaatgttttttttcccctgaGTTTAGTTGCTTGACAGTCCTAAAATGTCAGAATGCTAAGTGTTTCTTGAAATTGTTGGACACCTTGATACCAAAAAAAAGAAAGTCACCAGCCAGGCTTAAGAACCAATTCATATTTATGTCTCTAGATAATTTTGTACAAAGTGAGAGCTTAAGTGCACCTTTTAAAATCTATTGAAGTTCCTACCAGGGGCTTCTGCAAGTGCAACCTCATTGTGGTCAGGTAGAATTGGATTGTGCAGAAGACCACATTGAGAGTTGGCATAAGGAATGTCTGAACGACTCCAAGTGGAGTACTTTTCACAACTGAAAGCAATGAACGCATATATGATTGCAGCCATGTGTCTGGCCAGACCAACATTGTAGAACAGGCAGAATGTATCAAGTTGTTTTAATGTTTCTGAATAAGGCCAAGGAGAAACTTCAGCGTCCCTGGGACAGGTTAGTGACAGGTAATGGGACGATGAGTTTAACCGCATTCACATTCTGTAGGCATTGGTGGTAAAAGGCAGATTACTGTAAAGCAAACAGCCTACACTAAGGGACAGGTAAAGTAAGAACATATGAGGGATCTCTGACAAGTTAGAGAACTTTAGAATTTGAACTACCAGAAACAAATCTGTTTATACAAGTGTTGTGAACCACATTCCCTTTTACTCCAGGCCCACAGTCTgttcccaaacagcaagcacatGGTAGGCAGAAGAGAACATTATATTTTAAGGACAAGGTTTTTTGAAAGTCAAATGGTTTATTGAGCAAATCATGCAAGAGTAGCAGGAACACCAGGCTAAATCAAAAGCATAACCGTAGAACCTAAAAGTGTGTCAGGAATATCACTACATCAGAAGTCAATTTAGTCGCATGGTTATAAAAACAATTCATAACATTGTATCGTCCACCCCTGTAAACAATTTGCATGATGATGTACAAGTGAAGGAGATACTCATTTCAAACAAGCACATTAGTTGGCACATTTCCCCACCTCAGTTACCTTTACCCTTTTCTGCAATAGGCACAGTAACAGGGGTAAGACAAGGAGTTGGCCAAACCAAATTACGATCTCCCTAGTTGAGTGGTCGGGCCGTCTGTTCAAGGCTTGTCGCTTCTGCTGAGGCGCCGGGGCCTGTCGCTTCTGCTGAGGCGCCGGGTCCTGTCGCTTCTGCTGAGGCGCCGGGTCCTGTCGCTTCTGCTGAGGCGCCGGGTCCTGTCGCTTCTGCTGAGGCGCCGGGTCCTGTCGCTACTGCTGAGGCGCCGGACGCTACTGCTGAGCCGCCGGGGCTGGACTTCACACTTGACGTGGCATCGTGGCCAGTAGCTTCTGCTGACGTGACATCGTGGCCAGTAGCTTCTGCTGACGTGGCATTGTGGCCAGTAGCGTCTGCTGACGTGGTATTGTGGCCAGTAGCTTCTGCTGACGTGGCATTGTGGCCAGTAGCTTCTGCTGACGTGGCATTGTGGCCAGTAGCTTCTGCTGACGTGGCATTGTGGCCAGTAGCTTCCGCTGACGTGGCATTGTGGCCAGTAGCTTTAGCATTTGGACCAGACACCACACTTGCTTGGGCATAGGATCCAGTTGGTTCAGGTCCAGTGTAGGCAGGATGCCCATGAGCGTTACCTAGGAAACAAGGAAAACATTGTGGTAAAATGCCAGTCTTAATTTGGATCGGAACTAGACCTGTGATTTGACCTGAATTAGTGTAAACCAAAACACACCTTTAAGTGTAAAACACTTTATCCCTCCAATTAGCAGGCAACAAATCCAAGAAACACTACAAAACATTCAGACAGTTAAACATATAACGAGTGAAGACTTTAAGACATGGTAAACCAACCAGATGAACGCATCGAAAAACTAACCTCAAAGAGAGTACAAAAGCCATATTAGTGATCAAAACCACAACAGTTTTCAGAACTAATGCTAGACAGCCTGCCAGAATATCCCTGTTGCTATTTCTAACAGCTGTTTTGGTTGCACCTCATAAAGGCATCCCAGAACCTTCTCACCTGGTTGGCTAATTATGTACAGCTGTCAGCCAATGAACTTCATTTCCATTGGTTCATTTTCCCAAATGCTGTTAGGTGCAGTCATCCGTTGACGTATggtgaacaacagagagagaattgTACGACAAAAGAAagttcaacaacttacaaaaaaacaGACAATTGATGAACGCATATTAAATTTCATACATGTTCATGCGTCTGTAGCTGccaaattctgatctttttcccactaattggtcttttcacCAAACAGGTCAGCCGTTTTGCCAGCAACGCGGGGCAAAaggtcagaattgggctgcctgtgtaaacaaacAGACTATGAGGTAGTTTGTGATTGAGTCCAAACAGACTTCAGCCCTTTCCAAAGCTTAGACGTTGCTGAAGTCTGCCAGATCTTACATCGCCTTGATAGGTATTTTAAGTATcaactaaccacatcatatgtcaGTGGATGACAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU397941 True 3330 lncRNA 0.46 7 40322380 40453300

Neighbor

gene id symbol gene type direction distance location
LOC118964479 NA coding upstream 9699 40311638 ~ 40312681 (+)
syndig1l LOC106608262 coding upstream 56691 40182377 ~ 40268661 (+)
ino80 ino80 coding upstream 670674 39563579 ~ 39651706 (+)
vps18 LOC106608270 coding upstream 759760 39528427 ~ 39562620 (+)
pigh pigh coding upstream 843976 39473308 ~ 39478404 (+)
stmn4 LOC106608277 coding downstream 126386 40579686 ~ 40597389 (+)
paqr8 paqr8 coding downstream 173093 40626393 ~ 40630821 (+)
LOC110521109 LOC106608311 coding downstream 197354 40650654 ~ 40674839 (+)
LOC110522626 LOC106608310 coding downstream 255362 40708662 ~ 40714024 (+)
si:ch211-63o20.7 stk35 coding downstream 268226 40721526 ~ 40732661 (+)
G351466 NA non-coding upstream 52633 40233300 ~ 40269747 (+)
G351477 NA non-coding upstream 124729 40197198 ~ 40197651 (+)
G351451 NA non-coding upstream 170553 40151448 ~ 40151827 (+)
G351418 NA non-coding upstream 211898 40110253 ~ 40110482 (+)
G351739 NA non-coding downstream 12512 40465812 ~ 40466209 (+)
G351771 NA non-coding downstream 47624 40500924 ~ 40501156 (+)
G351773 NA non-coding downstream 48932 40502232 ~ 40502684 (+)
G351786 NA non-coding downstream 60418 40513718 ~ 40514109 (+)
G351789 NA non-coding downstream 144312 40597612 ~ 40598001 (+)
G351441 NA other upstream 185607 40134687 ~ 40136773 (+)
G350665 NA other upstream 932906 39388141 ~ 39389474 (+)
G350211 NA other upstream 1417606 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 1424724 38890314 ~ 38897681 (+)
G349877 NA other upstream 1888356 38432179 ~ 38434024 (+)
G352136 LOC106608303 other downstream 536859 40990159 ~ 40990505 (+)
G352340 NA other downstream 756947 41210247 ~ 41210998 (+)
G352341 NA other downstream 757813 41211113 ~ 41214206 (+)
G352477 NA other downstream 912901 41366201 ~ 41366607 (+)
G353125 NA other downstream 1671376 42124676 ~ 42125759 (+)

Expression


Co-expression Network