G351643


Basic Information

Item Value
gene id G351643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 40359939 ~ 40373918 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU397961
AAGCAGTGAGGGAGGAGCGCCCTTCTCAAATCGTACAGTCAGTGGTGTAATGGAGGCTTTACGCAGGTGTACCACTTTGTTTTCAATGGACATTTTGTGTACTCAATTCTTAATCCCCACTGATGTGTATCAAagtagtatagtggaggtatacgcTGTATCAATTCATAAGGCTGatggaacagatcagaatgttagAATCCAAATGTTGaaaaactattatttcttcacattttaagtGCATGAATGTGCACACGGTGGTAGACCTATTCAGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU397961 True 277 lncRNA 0.40 2 40359939 40373918

Neighbor

gene id symbol gene type direction distance location
LOC118964479 NA coding upstream 47258 40311638 ~ 40312681 (+)
syndig1l LOC106608262 coding upstream 94250 40182377 ~ 40268661 (+)
ino80 ino80 coding upstream 708233 39563579 ~ 39651706 (+)
vps18 LOC106608270 coding upstream 797319 39528427 ~ 39562620 (+)
pigh pigh coding upstream 881535 39473308 ~ 39478404 (+)
LOC118936457 NA coding downstream 5616 40379534 ~ 40386303 (+)
LOC110522596 LOC106591683 coding downstream 17732 40391650 ~ 40437808 (+)
stmn4 LOC106608277 coding downstream 205768 40579686 ~ 40597389 (+)
paqr8 paqr8 coding downstream 252475 40626393 ~ 40630821 (+)
LOC110521109 LOC106608311 coding downstream 276736 40650654 ~ 40674839 (+)
G351466 NA non-coding upstream 90192 40233300 ~ 40269747 (+)
G351477 NA non-coding upstream 162288 40197198 ~ 40197651 (+)
G351451 NA non-coding upstream 208112 40151448 ~ 40151827 (+)
G351418 NA non-coding upstream 249457 40110253 ~ 40110482 (+)
G351739 NA non-coding downstream 91894 40465812 ~ 40466209 (+)
G351771 NA non-coding downstream 127006 40500924 ~ 40501156 (+)
G351773 NA non-coding downstream 128314 40502232 ~ 40502684 (+)
G351786 NA non-coding downstream 139800 40513718 ~ 40514109 (+)
G351789 NA non-coding downstream 223694 40597612 ~ 40598001 (+)
G351441 NA other upstream 223166 40134687 ~ 40136773 (+)
G350665 NA other upstream 970465 39388141 ~ 39389474 (+)
G350211 NA other upstream 1455165 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 1462283 38890314 ~ 38897681 (+)
G349877 NA other upstream 1925915 38432179 ~ 38434024 (+)
G352136 LOC106608303 other downstream 616241 40990159 ~ 40990505 (+)
G352340 NA other downstream 836329 41210247 ~ 41210998 (+)
G352341 NA other downstream 837195 41211113 ~ 41214206 (+)
G352477 NA other downstream 992283 41366201 ~ 41366607 (+)
G353125 NA other downstream 1750758 42124676 ~ 42125759 (+)

Expression


Co-expression Network