Gene
RNA
| Item | Value |
|---|---|
| gene id | G351816 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 40715656 ~ 40716059 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU398196 | True | 404 | lncRNA | 0.37 | 1 | 40715656 | 40716059 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522626 | LOC106608310 | coding | upstream | 1632 | 40708662 ~ 40714024 (+) |
| LOC110521109 | LOC106608311 | coding | upstream | 41079 | 40650654 ~ 40674839 (+) |
| paqr8 | paqr8 | coding | upstream | 84835 | 40626393 ~ 40630821 (+) |
| stmn4 | LOC106608277 | coding | upstream | 118267 | 40579686 ~ 40597389 (+) |
| LOC110522596 | LOC106591683 | coding | upstream | 277848 | 40391650 ~ 40437808 (+) |
| si:ch211-63o20.7 | stk35 | coding | downstream | 5467 | 40721526 ~ 40732661 (+) |
| LOC110521111 | LOC106571044 | coding | downstream | 62299 | 40778358 ~ 40868194 (+) |
| hmbox1b | LOC106608307 | coding | downstream | 152281 | 40868340 ~ 40887505 (+) |
| abcd4 | abcd4 | coding | downstream | 202181 | 40918240 ~ 40945004 (+) |
| LOC118964481 | NA | coding | downstream | 224572 | 40940631 ~ 40940967 (+) |
| G351847 | NA | non-coding | upstream | 16358 | 40699076 ~ 40699298 (+) |
| G351843 | NA | non-coding | upstream | 24617 | 40690336 ~ 40691039 (+) |
| G351840 | NA | non-coding | upstream | 27671 | 40687346 ~ 40687985 (+) |
| G351826 | NA | non-coding | upstream | 37486 | 40677593 ~ 40678170 (+) |
| G351940 | NA | non-coding | downstream | 20178 | 40736237 ~ 40736542 (+) |
| G351960 | elp3 | non-coding | downstream | 42436 | 40758495 ~ 40764040 (+) |
| G351963 | NA | non-coding | downstream | 61305 | 40777364 ~ 40778213 (+) |
| G351441 | NA | other | upstream | 578883 | 40134687 ~ 40136773 (+) |
| G350665 | NA | other | upstream | 1326182 | 39388141 ~ 39389474 (+) |
| G350211 | NA | other | upstream | 1810882 | 38903730 ~ 38904774 (+) |
| LOC110522591 | LOC105024333 | other | upstream | 1818000 | 38890314 ~ 38897681 (+) |
| G349877 | NA | other | upstream | 2281632 | 38432179 ~ 38434024 (+) |
| G352136 | LOC106608303 | other | downstream | 274100 | 40990159 ~ 40990505 (+) |
| G352340 | NA | other | downstream | 494188 | 41210247 ~ 41210998 (+) |
| G352341 | NA | other | downstream | 495054 | 41211113 ~ 41214206 (+) |
| G352477 | NA | other | downstream | 650142 | 41366201 ~ 41366607 (+) |
| G353125 | NA | other | downstream | 1408617 | 42124676 ~ 42125759 (+) |
