G351963


Basic Information

Item Value
gene id G351963
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 40777364 ~ 40778213 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU398498
CTTGTTGAGGTTTATGTCTTTTCCCTCTTCATGCGCCTCGACCAGCTGATTGATGACATCCGCAATGGTCATCATCATTAACTCTGCACGGCTCAGATCACCCATATCTGAAGTTACGTTGACGCTGTGAATTTACAATATGAAACGTGTTATTAACTTGGAAAATGTGGAGAACTTTCAACTTTGTAAACAACCCTACGTAATCAAGCTTGCACGACTCCTGCCGTCCACCCCTGTAAACGGTCGTAAAATAACGTAAAAACACAGCGCTTCTTTTTTTATTCCGAGAAATTCCCTGTCCATAATAAAATAATGTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU398498 True 319 lncRNA 0.40 2 40777364 40778213

Neighbor

gene id symbol gene type direction distance location
si:ch211-63o20.7 stk35 coding upstream 45013 40721526 ~ 40732661 (+)
LOC110522626 LOC106608310 coding upstream 63340 40708662 ~ 40714024 (+)
LOC110521109 LOC106608311 coding upstream 102787 40650654 ~ 40674839 (+)
paqr8 paqr8 coding upstream 146543 40626393 ~ 40630821 (+)
stmn4 LOC106608277 coding upstream 179975 40579686 ~ 40597389 (+)
LOC110521111 LOC106571044 coding downstream 145 40778358 ~ 40868194 (+)
hmbox1b LOC106608307 coding downstream 90127 40868340 ~ 40887505 (+)
abcd4 abcd4 coding downstream 140027 40918240 ~ 40945004 (+)
LOC118964481 NA coding downstream 162418 40940631 ~ 40940967 (+)
LOC118964399 LOC106608301 coding downstream 260024 41038237 ~ 41041039 (+)
G351960 elp3 non-coding upstream 13324 40758495 ~ 40764040 (+)
G351940 NA non-coding upstream 40822 40736237 ~ 40736542 (+)
G351816 NA non-coding upstream 61305 40715656 ~ 40716059 (+)
G351847 NA non-coding upstream 78066 40699076 ~ 40699298 (+)
G352002 NA non-coding downstream 99444 40877657 ~ 40878233 (+)
G352007 NA non-coding downstream 117915 40896128 ~ 40897440 (+)
G351974 NA non-coding downstream 157914 40936127 ~ 40941155 (+)
G352117 NA non-coding downstream 178680 40956893 ~ 40957205 (+)
G351441 NA other upstream 640591 40134687 ~ 40136773 (+)
G350665 NA other upstream 1387890 39388141 ~ 39389474 (+)
G350211 NA other upstream 1872590 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 1879708 38890314 ~ 38897681 (+)
G349877 NA other upstream 2343340 38432179 ~ 38434024 (+)
G352136 LOC106608303 other downstream 211946 40990159 ~ 40990505 (+)
G352340 NA other downstream 432034 41210247 ~ 41210998 (+)
G352341 NA other downstream 432900 41211113 ~ 41214206 (+)
G352477 NA other downstream 587988 41366201 ~ 41366607 (+)
G353125 NA other downstream 1346463 42124676 ~ 42125759 (+)

Expression


Co-expression Network