G352316


Basic Information

Item Value
gene id G352316
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 41184343 ~ 41184578 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU398952
ttataaaggtcctggatggcgggaagcttggccccagtgatgaactgggccgttcgcactaccctctgtaccgccttacagtcagatgccgagcagttgccataccagcaggtgatgcaaccggtcaggatgctctcgatggtgcagctatagaaccttttgaggatctggggacccatgccaaatcttttcagtctcctgagggggaaaatattTTGTcgcgccctcttcacgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU398952 True 236 lncRNA 0.54 1 41184343 41184578

Neighbor

gene id symbol gene type direction distance location
LOC110521114 LOC106608298 coding upstream 98655 41071482 ~ 41085688 (+)
LOC118964399 LOC106608301 coding upstream 143304 41038237 ~ 41041039 (+)
abcd4 abcd4 coding upstream 239339 40918240 ~ 40945004 (+)
LOC118964481 NA coding upstream 243376 40940631 ~ 40940967 (+)
hmbox1b LOC106608307 coding upstream 296838 40868340 ~ 40887505 (+)
LOC110522636 LOC106608297 coding downstream 242302 41426880 ~ 41445268 (+)
LOC110522641 LOC106608294 coding downstream 464214 41648792 ~ 41651426 (+)
LOC110522642 LOC106608292 coding downstream 480024 41664602 ~ 41675680 (+)
LOC110522643 LOC106608291 coding downstream 491683 41676261 ~ 41681946 (+)
LOC110522644 ptk2b coding downstream 699687 41884265 ~ 41934580 (+)
G352240 NA non-coding upstream 37325 41144830 ~ 41147018 (+)
G352231 NA non-coding upstream 57500 41125004 ~ 41126843 (+)
G352213 NA non-coding upstream 86637 41091055 ~ 41097706 (+)
G352195 NA non-coding upstream 119606 41064217 ~ 41064737 (+)
G352319 NA non-coding downstream 1846 41186424 ~ 41186634 (+)
G352329 NA non-coding downstream 8379 41192957 ~ 41193335 (+)
G352341 NA non-coding downstream 26535 41211113 ~ 41214206 (+)
G352344 NA non-coding downstream 35142 41219720 ~ 41221378 (+)
G352362 NA non-coding downstream 77942 41262520 ~ 41269549 (+)
G352136 LOC106608303 other upstream 193838 40990159 ~ 40990505 (+)
G351441 NA other upstream 1047570 40134687 ~ 40136773 (+)
G350665 NA other upstream 1794869 39388141 ~ 39389474 (+)
G350211 NA other upstream 2279569 38903730 ~ 38904774 (+)
LOC110522591 LOC105024333 other upstream 2286687 38890314 ~ 38897681 (+)
G352340 NA other downstream 25669 41210247 ~ 41210998 (+)
G352477 NA other downstream 181623 41366201 ~ 41366607 (+)
G353125 NA other downstream 940098 42124676 ~ 42125759 (+)
LOC118964483 NA other downstream 1135122 42319401 ~ 42328637 (+)

Expression


Co-expression Network