G352377


Basic Information

Item Value
gene id G352377
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 41291969 ~ 41299233 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU399035
actgtccctgtatatagctactgaccctgtatatagctactgaccctggaactgaccctgtatatagctactgaccctgtatatagctactgaccctgtatatagctactgaccctggaactgaccctgtatatagctactgaccctggaactgaccctgtatatagctactgaccctgtatatagctactgaccctgtatatagctactgaccctgtatatagctactgaccctgtatatagctactgaccctgtatatagctactgtccctgtatatagttactgaccctgtatataactactgaccctgtatataactactgtccctgtatatagctactgaccctgtatataactactgaccctgtatataactactgaccctgtatatagctactgaccctgtatataactactgaccctgtatataactactgtccctgtatatagctactgaccctagaactgaccctgtatatagctactgaccctagaactgaccctgtatatagctactgaccctagaactgaccctgtat

Function

NR:

description
PREDICTED: salivary glue protein Sgs-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU399035 True 541 lncRNA 0.43 2 41291969 41299233

Neighbor

gene id symbol gene type direction distance location
LOC110521114 LOC106608298 coding upstream 206281 41071482 ~ 41085688 (+)
LOC118964399 LOC106608301 coding upstream 250930 41038237 ~ 41041039 (+)
abcd4 abcd4 coding upstream 346965 40918240 ~ 40945004 (+)
LOC118964481 NA coding upstream 351002 40940631 ~ 40940967 (+)
hmbox1b LOC106608307 coding upstream 404464 40868340 ~ 40887505 (+)
LOC110522636 LOC106608297 coding downstream 127647 41426880 ~ 41445268 (+)
LOC110522641 LOC106608294 coding downstream 349559 41648792 ~ 41651426 (+)
LOC110522642 LOC106608292 coding downstream 365369 41664602 ~ 41675680 (+)
LOC110522643 LOC106608291 coding downstream 377028 41676261 ~ 41681946 (+)
LOC110522644 ptk2b coding downstream 585032 41884265 ~ 41934580 (+)
G352373 LOC106581475 non-coding upstream 1917 41289736 ~ 41290052 (+)
G352364 NA non-coding upstream 17388 41273873 ~ 41274581 (+)
G352362 NA non-coding upstream 22420 41262520 ~ 41269549 (+)
G352344 NA non-coding upstream 70591 41219720 ~ 41221378 (+)
G352341 NA non-coding upstream 77763 41211113 ~ 41214206 (+)
G352384 NA non-coding downstream 16780 41316013 ~ 41316385 (+)
G352385 NA non-coding downstream 17402 41316635 ~ 41317071 (+)
G352386 NA non-coding downstream 19367 41318600 ~ 41318821 (+)
G352389 NA non-coding downstream 21820 41321053 ~ 41321338 (+)
G352457 NA non-coding downstream 32960 41332193 ~ 41332530 (+)
G352340 NA other upstream 80971 41210247 ~ 41210998 (+)
G352136 LOC106608303 other upstream 301464 40990159 ~ 40990505 (+)
G351441 NA other upstream 1155196 40134687 ~ 40136773 (+)
G350665 NA other upstream 1902495 39388141 ~ 39389474 (+)
G352477 NA other downstream 66968 41366201 ~ 41366607 (+)
G353125 NA other downstream 825443 42124676 ~ 42125759 (+)
LOC118964483 NA other downstream 1020467 42319401 ~ 42328637 (+)
G353328 LOC106608329 other downstream 1143522 42442755 ~ 42443381 (+)
G353339 NA other downstream 1151799 42451032 ~ 42451409 (+)

Expression


Co-expression Network