G352389


Basic Information

Item Value
gene id G352389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 41321053 ~ 41321338 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU399049
ataaagcatcctgagaccattcatgtgtggggttgcttctcagccaagggagtgggctcacccacaattttgcctaagaacacagccatgaatgaaGAATGGCAcgaacacatcctctgagagcatcttctcccaaccatccaggaacagtgtgatgacgaacaatgccttttccagcatgatggagcaccttgcacataaggcaaaagtgataactaagtggctcggggaacaaaacatcgatattttgggtccatggccaggaaactcgcccagaccttaatcc

Function

NR:

description
transposase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU399049 True 286 lncRNA 0.48 1 41321053 41321338

Neighbor

gene id symbol gene type direction distance location
LOC110521114 LOC106608298 coding upstream 235365 41071482 ~ 41085688 (+)
LOC118964399 LOC106608301 coding upstream 280014 41038237 ~ 41041039 (+)
abcd4 abcd4 coding upstream 376049 40918240 ~ 40945004 (+)
LOC118964481 NA coding upstream 380086 40940631 ~ 40940967 (+)
hmbox1b LOC106608307 coding upstream 433548 40868340 ~ 40887505 (+)
LOC110522636 LOC106608297 coding downstream 105542 41426880 ~ 41445268 (+)
LOC110522641 LOC106608294 coding downstream 327454 41648792 ~ 41651426 (+)
LOC110522642 LOC106608292 coding downstream 343264 41664602 ~ 41675680 (+)
LOC110522643 LOC106608291 coding downstream 354923 41676261 ~ 41681946 (+)
LOC110522644 ptk2b coding downstream 562927 41884265 ~ 41934580 (+)
G352386 NA non-coding upstream 2232 41318600 ~ 41318821 (+)
G352385 NA non-coding upstream 3982 41316635 ~ 41317071 (+)
G352384 NA non-coding upstream 4668 41316013 ~ 41316385 (+)
G352376 NA non-coding upstream 17852 41294017 ~ 41303201 (+)
G352377 NA non-coding upstream 21820 41291969 ~ 41299233 (+)
G352457 NA non-coding downstream 10855 41332193 ~ 41332530 (+)
G352478 NA non-coding downstream 46117 41367455 ~ 41367724 (+)
G352481 NA non-coding downstream 57224 41378562 ~ 41378887 (+)
G352493 NA non-coding downstream 101222 41422560 ~ 41422773 (+)
G352472 NA non-coding downstream 125029 41446367 ~ 41447543 (+)
G352341 NA other upstream 107104 41211113 ~ 41214206 (+)
G352340 NA other upstream 110055 41210247 ~ 41210998 (+)
G352136 LOC106608303 other upstream 330548 40990159 ~ 40990505 (+)
G351441 NA other upstream 1184280 40134687 ~ 40136773 (+)
G350665 NA other upstream 1931579 39388141 ~ 39389474 (+)
G352477 NA other downstream 44863 41366201 ~ 41366607 (+)
G353125 NA other downstream 803338 42124676 ~ 42125759 (+)
LOC118964483 NA other downstream 998362 42319401 ~ 42328637 (+)
G353328 LOC106608329 other downstream 1121417 42442755 ~ 42443381 (+)
G353339 NA other downstream 1129694 42451032 ~ 42451409 (+)

Expression


Co-expression Network