G352556


Basic Information

Item Value
gene id G352556
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 41460991 ~ 41461212 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU399249
CTCACTGTTATCatggatttacatacagaactGATTGTAAGGGATCGCTTCCATTGActgagaggcggaccaaagcgcagcgtggttattttgactcatgttttaataaatcacttcacatgaacaaactaacaaaaacaagaaacgtgaaaacccaaaacagccctatctggtgcaaaacacagagacaggaacaatcacccacaaacacacagtgacccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU399249 True 222 lncRNA 0.42 1 41460991 41461212

Neighbor

gene id symbol gene type direction distance location
LOC110522636 LOC106608297 coding upstream 15723 41426880 ~ 41445268 (+)
LOC110521114 LOC106608298 coding upstream 375303 41071482 ~ 41085688 (+)
LOC118964399 LOC106608301 coding upstream 419952 41038237 ~ 41041039 (+)
abcd4 abcd4 coding upstream 515987 40918240 ~ 40945004 (+)
LOC110522641 LOC106608294 coding downstream 187580 41648792 ~ 41651426 (+)
LOC110522642 LOC106608292 coding downstream 203390 41664602 ~ 41675680 (+)
LOC110522643 LOC106608291 coding downstream 215049 41676261 ~ 41681946 (+)
LOC110522644 ptk2b coding downstream 423053 41884265 ~ 41934580 (+)
LOC118964483 NA coding downstream 858189 42319401 ~ 42328637 (+)
G352507 NA non-coding upstream 12561 41448128 ~ 41448430 (+)
G352472 NA non-coding upstream 13448 41446367 ~ 41447543 (+)
G352493 NA non-coding upstream 38218 41422560 ~ 41422773 (+)
G352481 NA non-coding upstream 82104 41378562 ~ 41378887 (+)
G352478 NA non-coding upstream 93267 41367455 ~ 41367724 (+)
G352558 NA non-coding downstream 3717 41464929 ~ 41465167 (+)
G352562 NA non-coding downstream 14271 41475483 ~ 41475845 (+)
G352563 NA non-coding downstream 15624 41476836 ~ 41477260 (+)
G352564 NA non-coding downstream 21918 41483130 ~ 41483362 (+)
G352565 NA non-coding downstream 23060 41484272 ~ 41484472 (+)
G352477 NA other upstream 94384 41366201 ~ 41366607 (+)
G352341 NA other upstream 247042 41211113 ~ 41214206 (+)
G352340 NA other upstream 249993 41210247 ~ 41210998 (+)
G352136 LOC106608303 other upstream 470486 40990159 ~ 40990505 (+)
G351441 NA other upstream 1324218 40134687 ~ 40136773 (+)
G353125 NA other downstream 663464 42124676 ~ 42125759 (+)
G353328 LOC106608329 other downstream 981543 42442755 ~ 42443381 (+)
G353339 NA other downstream 989820 42451032 ~ 42451409 (+)
G353820 NA other downstream 1449674 42910886 ~ 42912213 (+)

Expression


Co-expression Network