G352563


Basic Information

Item Value
gene id G352563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 41476836 ~ 41477260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU399256
gtggacaggtgtcttttatacaggtaacaagttcaaacaggtgcagttaatacaggtaatgagtggagaacaggagggcttcttaaagaaaaacgaacaggtctgtgagagccggaattcttactggttggtaggtgatcaaatacttatgtcatgcaataaaatgcaaattaattacttaaaaatcatacaatgtgattttctggatttttgttttagattccgtctctcacagttgaagtgtacctatgataaaaattacagacctctacatgctttgtaagtgggaaaacctgcaaaatcggcagtgtatcaaatacttgttctccccactgtatatttacaatggggcaaaaaagtatttagtcagccatcaattgtgcaagttctcccacttaaaaagatgagagagacctgtaattttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU399256 True 425 lncRNA 0.37 1 41476836 41477260

Neighbor

gene id symbol gene type direction distance location
LOC110522636 LOC106608297 coding upstream 31568 41426880 ~ 41445268 (+)
LOC110521114 LOC106608298 coding upstream 391148 41071482 ~ 41085688 (+)
LOC118964399 LOC106608301 coding upstream 435797 41038237 ~ 41041039 (+)
abcd4 abcd4 coding upstream 531832 40918240 ~ 40945004 (+)
LOC110522641 LOC106608294 coding downstream 171532 41648792 ~ 41651426 (+)
LOC110522642 LOC106608292 coding downstream 187342 41664602 ~ 41675680 (+)
LOC110522643 LOC106608291 coding downstream 199001 41676261 ~ 41681946 (+)
LOC110522644 ptk2b coding downstream 407005 41884265 ~ 41934580 (+)
LOC118964483 NA coding downstream 842141 42319401 ~ 42328637 (+)
G352562 NA non-coding upstream 991 41475483 ~ 41475845 (+)
G352558 NA non-coding upstream 11669 41464929 ~ 41465167 (+)
G352556 NA non-coding upstream 15624 41460991 ~ 41461212 (+)
G352507 NA non-coding upstream 28406 41448128 ~ 41448430 (+)
G352472 NA non-coding upstream 29293 41446367 ~ 41447543 (+)
G352564 NA non-coding downstream 5870 41483130 ~ 41483362 (+)
G352565 NA non-coding downstream 7012 41484272 ~ 41484472 (+)
G352568 NA non-coding downstream 9416 41486676 ~ 41487023 (+)
G352570 NA non-coding downstream 12050 41489310 ~ 41489608 (+)
G352579 NA non-coding downstream 29292 41506552 ~ 41506936 (+)
G352477 NA other upstream 110229 41366201 ~ 41366607 (+)
G352341 NA other upstream 262887 41211113 ~ 41214206 (+)
G352340 NA other upstream 265838 41210247 ~ 41210998 (+)
G352136 LOC106608303 other upstream 486331 40990159 ~ 40990505 (+)
G351441 NA other upstream 1340063 40134687 ~ 40136773 (+)
G353125 NA other downstream 647416 42124676 ~ 42125759 (+)
G353328 LOC106608329 other downstream 965495 42442755 ~ 42443381 (+)
G353339 NA other downstream 973772 42451032 ~ 42451409 (+)
G353820 NA other downstream 1433626 42910886 ~ 42912213 (+)

Expression


Co-expression Network