G352579


Basic Information

Item Value
gene id G352579
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 41506552 ~ 41506936 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU399272
GTATAAAGATGGACCCTTAACATCCAAAACACAAGAGCATTCAAAGCCAAATGAAATCAATGGAACACAAAAATCCTCCTGAAGTCTGTTTATAACCAAATGATTCTACAGTACGTAACCAAGCAACATTCTTGTGGGACTGTTATGGTTTGTCTCCTTGGTGATCTTCATGAAGAAAGAACAGGAGTAAATGACAAAATTATATAATTATTGATAACCCAAAGCATTTTCACCAGGTGATAGGGAGAAGGTAAACAAACAAGAACAATAGTTGTATCTGAAAACACACAAATTACCTGGAGAGTATTTACAGTGctctcggaaagtattcagaccccttgactttttccatattttgttacgttacagccttattctaaaatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU399272 True 385 lncRNA 0.36 1 41506552 41506936

Neighbor

gene id symbol gene type direction distance location
LOC110522636 LOC106608297 coding upstream 61284 41426880 ~ 41445268 (+)
LOC110521114 LOC106608298 coding upstream 420864 41071482 ~ 41085688 (+)
LOC118964399 LOC106608301 coding upstream 465513 41038237 ~ 41041039 (+)
abcd4 abcd4 coding upstream 561548 40918240 ~ 40945004 (+)
LOC110522641 LOC106608294 coding downstream 141856 41648792 ~ 41651426 (+)
LOC110522642 LOC106608292 coding downstream 157666 41664602 ~ 41675680 (+)
LOC110522643 LOC106608291 coding downstream 169325 41676261 ~ 41681946 (+)
LOC110522644 ptk2b coding downstream 377329 41884265 ~ 41934580 (+)
LOC118964483 NA coding downstream 812465 42319401 ~ 42328637 (+)
G352570 NA non-coding upstream 16944 41489310 ~ 41489608 (+)
G352568 NA non-coding upstream 19529 41486676 ~ 41487023 (+)
G352565 NA non-coding upstream 22080 41484272 ~ 41484472 (+)
G352564 NA non-coding upstream 23190 41483130 ~ 41483362 (+)
G352563 NA non-coding upstream 29292 41476836 ~ 41477260 (+)
G352583 NA non-coding downstream 10152 41517088 ~ 41517351 (+)
G352572 NA non-coding downstream 20531 41527467 ~ 41527760 (+)
G352573 NA non-coding downstream 20994 41527930 ~ 41529099 (+)
G352574 NA non-coding downstream 23395 41530331 ~ 41530720 (+)
G352591 NA non-coding downstream 27180 41534116 ~ 41534548 (+)
G352477 NA other upstream 139945 41366201 ~ 41366607 (+)
G352341 NA other upstream 292603 41211113 ~ 41214206 (+)
G352340 NA other upstream 295554 41210247 ~ 41210998 (+)
G352136 LOC106608303 other upstream 516047 40990159 ~ 40990505 (+)
G351441 NA other upstream 1369779 40134687 ~ 40136773 (+)
G353125 NA other downstream 617740 42124676 ~ 42125759 (+)
G353328 LOC106608329 other downstream 935819 42442755 ~ 42443381 (+)
G353339 NA other downstream 944096 42451032 ~ 42451409 (+)
G353820 NA other downstream 1403950 42910886 ~ 42912213 (+)

Expression


Co-expression Network