G352573


Basic Information

Item Value
gene id G352573
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 41527930 ~ 41529099 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU399266
tcaaccagctttgaggtagtcacctggaatgcatttcaattaacaggtgtgaatTTTTTAAAGTtaatatgtggaatttctttccttcttaatgcatttgaaccaatcagttatATTATGACAAggaaggggtggtatacagaagacagccctatttggtaaaagaccaaatctatattatgtcaagaacagctcaaataagcaaagagaaacgacagtccattccTTTGAAGGCAAGTCAATACGGAATTATTTTACAATGTTGACAGTTTCAAGTGCAGTtggaaaaaccatcaagcactatgataaactggctctcatgaggaccgccacaggaaagggagacccagagttacctctgctgcaaaggataagtgttcattagagttactagcctcagaaattgcagcccaaataaatgctttagagTTTAAGAGACATCTCACCATCAACTGTTCTGAGGACactgcagcaattcgaccatgaaggcctgattcatgcaaagaaaccacaactaaaggacaccaataagacgaggagacttgcttgggccaagaaacacgagcaacggccattagaccggtgaaaatctgtcttttggtctgatttttggttccaaccgccatgtctttgtgagacgcagagaaggtgaacggatgatctccgcatgtgtatttcccactgtgaagcatggaggaggaggtgttatggcgtgacggtgctttgctggtgacactgtcagtgatataTTTAAAATTaaaaggcacacttaatcagaaTGGCTGCCACAGCATCCTGCAGCGATACATCATTACATCTGGTCTGAactttgtgggactatcatttgtttttcaacaggacaatgatccaaaacacaccgccACCATGTGTAAGCGCTAtttgagagtgatggagtgctgcatcagatgacctggcctccacaatcacccgacagcAACCCAATTGAAGTGGTTTGtatgagtcggactgcagagtgaaggaattgctgtaaacaagtgctcagcatatgtgggaactccttcaagactgttgaaaaagcattcctcatgaagctggttgagagaatgccaagagtgtgcaaagcagtcatcaaggcaaagcgtggctgctttgaagaatctcaaatatattttcatttgtttaacactt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU399266 True 1170 lncRNA 0.42 1 41527930 41529099

Neighbor

gene id symbol gene type direction distance location
LOC110522636 LOC106608297 coding upstream 82662 41426880 ~ 41445268 (+)
LOC110521114 LOC106608298 coding upstream 442242 41071482 ~ 41085688 (+)
LOC118964399 LOC106608301 coding upstream 486891 41038237 ~ 41041039 (+)
abcd4 abcd4 coding upstream 582926 40918240 ~ 40945004 (+)
LOC110522641 LOC106608294 coding downstream 119693 41648792 ~ 41651426 (+)
LOC110522642 LOC106608292 coding downstream 135503 41664602 ~ 41675680 (+)
LOC110522643 LOC106608291 coding downstream 147162 41676261 ~ 41681946 (+)
LOC110522644 ptk2b coding downstream 355166 41884265 ~ 41934580 (+)
LOC118964483 NA coding downstream 790302 42319401 ~ 42328637 (+)
G352572 NA non-coding upstream 170 41527467 ~ 41527760 (+)
G352583 NA non-coding upstream 10579 41517088 ~ 41517351 (+)
G352579 NA non-coding upstream 20994 41506552 ~ 41506936 (+)
G352570 NA non-coding upstream 38322 41489310 ~ 41489608 (+)
G352568 NA non-coding upstream 40907 41486676 ~ 41487023 (+)
G352574 NA non-coding downstream 1232 41530331 ~ 41530720 (+)
G352591 NA non-coding downstream 5017 41534116 ~ 41534548 (+)
G352620 NA non-coding downstream 48476 41577575 ~ 41578691 (+)
G352596 NA non-coding downstream 61296 41590395 ~ 41682746 (+)
G352637 NA non-coding downstream 78886 41607985 ~ 41609310 (+)
G352477 NA other upstream 161323 41366201 ~ 41366607 (+)
G352341 NA other upstream 313981 41211113 ~ 41214206 (+)
G352340 NA other upstream 316932 41210247 ~ 41210998 (+)
G352136 LOC106608303 other upstream 537425 40990159 ~ 40990505 (+)
G351441 NA other upstream 1391157 40134687 ~ 40136773 (+)
G353125 NA other downstream 595577 42124676 ~ 42125759 (+)
G353328 LOC106608329 other downstream 913656 42442755 ~ 42443381 (+)
G353339 NA other downstream 921933 42451032 ~ 42451409 (+)
G353820 NA other downstream 1381787 42910886 ~ 42912213 (+)

Expression


Co-expression Network