G352644


Basic Information

Item Value
gene id G352644
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 41618405 ~ 41618883 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU399359
GTCGCCTCCTGCCTGCTAGCTAGGTCTAGTTGTGGCAtggctagctgttagctaggtCTAGTTGTGGCAtggctagctgttagctaggtCTAGTTGTTGCAtggctagctgttagctaggtCTAGTTGTTGCAtggctagctgttagctaggtCTAGTTGTTGCAtggctagctgttagctaggtCTAGTTGTTGCAtggctagctgttagctaggtCTAGTTGTGGCAtggctagctgttagctaggtTTAGTTGTTGCatggctagctgttagctaagtCTAGTTGTTGCAtggctagctgttagctaggtCTAGTTGTTGCATGGCTAGCTGAAATGAGTCTAGTGTCaggagggagcaggcaggcagCTTGGCTATCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU399359 True 383 lncRNA 0.50 2 41618405 41618883

Neighbor

gene id symbol gene type direction distance location
LOC110522636 LOC106608297 coding upstream 173137 41426880 ~ 41445268 (+)
LOC110521114 LOC106608298 coding upstream 532717 41071482 ~ 41085688 (+)
LOC118964399 LOC106608301 coding upstream 577366 41038237 ~ 41041039 (+)
abcd4 abcd4 coding upstream 673401 40918240 ~ 40945004 (+)
LOC110522641 LOC106608294 coding downstream 29909 41648792 ~ 41651426 (+)
LOC110522642 LOC106608292 coding downstream 45719 41664602 ~ 41675680 (+)
LOC110522643 LOC106608291 coding downstream 57378 41676261 ~ 41681946 (+)
LOC110522644 ptk2b coding downstream 265382 41884265 ~ 41934580 (+)
LOC118964483 NA coding downstream 700518 42319401 ~ 42328637 (+)
G352637 NA non-coding upstream 9095 41607985 ~ 41609310 (+)
G352620 NA non-coding upstream 39714 41577575 ~ 41578691 (+)
G352591 NA non-coding upstream 83857 41534116 ~ 41534548 (+)
G352574 NA non-coding upstream 87685 41530331 ~ 41530720 (+)
G352573 NA non-coding upstream 89306 41527930 ~ 41529099 (+)
G352679 LOC106608275 non-coding downstream 71999 41690882 ~ 41691650 (+)
G352678 LOC106608275 non-coding downstream 74515 41693398 ~ 41705825 (+)
G352677 zc3h14 non-coding downstream 83671 41702554 ~ 41703383 (+)
G352889 NA non-coding downstream 160773 41779656 ~ 41779863 (+)
G352898 NA non-coding downstream 166940 41785823 ~ 41786631 (+)
G352477 NA other upstream 251798 41366201 ~ 41366607 (+)
G352341 NA other upstream 404456 41211113 ~ 41214206 (+)
G352340 NA other upstream 407407 41210247 ~ 41210998 (+)
G352136 LOC106608303 other upstream 627900 40990159 ~ 40990505 (+)
G351441 NA other upstream 1481632 40134687 ~ 40136773 (+)
G353125 NA other downstream 505793 42124676 ~ 42125759 (+)
G353328 LOC106608329 other downstream 823872 42442755 ~ 42443381 (+)
G353339 NA other downstream 832149 42451032 ~ 42451409 (+)
G353820 NA other downstream 1292003 42910886 ~ 42912213 (+)

Expression


Co-expression Network