G352985


Basic Information

Item Value
gene id G352985
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 41949432 ~ 41949638 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU399758
GAGATGGTGAAACTGAACGTTTTTATTGATGTAAAATGATCACGGTATTGGGATAAGGGAGAGAAGAAAAAACACATCTGTTTTGCAAGCGGTACGTTCACGATAGGCTCTTGTCTATTCAGCTGTGACCGTTTTGTCGTTGGACACGCTAAATGTACGATAGACAGTTTCGTTTGGAGTTGAGTCGGAtctccccatctctgtccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU399758 True 207 lncRNA 0.43 1 41949432 41949638

Neighbor

gene id symbol gene type direction distance location
LOC110522644 ptk2b coding upstream 14852 41884265 ~ 41934580 (+)
LOC110522643 LOC106608291 coding upstream 267486 41676261 ~ 41681946 (+)
LOC110522642 LOC106608292 coding upstream 273752 41664602 ~ 41675680 (+)
LOC110522641 LOC106608294 coding upstream 298006 41648792 ~ 41651426 (+)
LOC110522636 LOC106608297 coding upstream 504164 41426880 ~ 41445268 (+)
LOC118964483 NA coding downstream 369763 42319401 ~ 42328637 (+)
eif2b4 LOC106608321 coding downstream 380104 42329742 ~ 42364354 (+)
LOC110522651 LOC106608319 coding downstream 421182 42370820 ~ 42433129 (+)
si:ch211-278j3.3 LOC106608328 coding downstream 510720 42460358 ~ 42514461 (+)
si:dkey-71h2.2 LOC104922452 coding downstream 572148 42521786 ~ 42630516 (+)
G352982 NA non-coding upstream 4708 41944522 ~ 41944724 (+)
G352981 NA non-coding upstream 6632 41942545 ~ 41942800 (+)
G352976 NA non-coding upstream 28584 41920316 ~ 41920848 (+)
G352974 NA non-coding upstream 30672 41917045 ~ 41918760 (+)
G352972 NA non-coding upstream 42245 41905742 ~ 41907187 (+)
G352986 NA non-coding downstream 5120 41954758 ~ 41955098 (+)
G352988 NA non-coding downstream 17004 41966642 ~ 41966841 (+)
G352991 NA non-coding downstream 21755 41971393 ~ 42031934 (+)
G353003 NA non-coding downstream 63479 42013117 ~ 42013838 (+)
G353015 NA non-coding downstream 107304 42056942 ~ 42057601 (+)
G352477 NA other upstream 582825 41366201 ~ 41366607 (+)
G352341 NA other upstream 735483 41211113 ~ 41214206 (+)
G352340 NA other upstream 738434 41210247 ~ 41210998 (+)
G352136 LOC106608303 other upstream 958927 40990159 ~ 40990505 (+)
G351441 NA other upstream 1812659 40134687 ~ 40136773 (+)
G353125 NA other downstream 175038 42124676 ~ 42125759 (+)
G353328 LOC106608329 other downstream 493117 42442755 ~ 42443381 (+)
G353339 NA other downstream 501394 42451032 ~ 42451409 (+)
G353820 NA other downstream 961248 42910886 ~ 42912213 (+)

Expression


Co-expression Network