G353003


Basic Information

Item Value
gene id G353003
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 42013117 ~ 42013838 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU399786
CATTTAGGATACaaactcagtctggttaagacaggctataagactcagtctggttatgacaggctataagactcagtctggttaagacaggctataagactcagtctggttaagacagactataggactcagtctggttaagacaggctataggactcagtctggttaagtcAGACTATAGGCAGACTATAAGattcagtctggttaagacagactataggactcagtctggttaagacagactatacGACTCAGTCTGTTAAGATAGGCTATAAggctcagtctggttaagacaggctataagacagtctggttaagacagactataggactcagtctggttaagacagactataagactcagtctggttaagacaggctataagactcagtctggttaagacagactata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU399786 True 412 lncRNA 0.42 2 42013117 42013838

Neighbor

gene id symbol gene type direction distance location
LOC110522644 ptk2b coding upstream 78537 41884265 ~ 41934580 (+)
LOC110522643 LOC106608291 coding upstream 331171 41676261 ~ 41681946 (+)
LOC110522642 LOC106608292 coding upstream 337437 41664602 ~ 41675680 (+)
LOC110522641 LOC106608294 coding upstream 361691 41648792 ~ 41651426 (+)
LOC110522636 LOC106608297 coding upstream 567849 41426880 ~ 41445268 (+)
LOC118964483 NA coding downstream 305563 42319401 ~ 42328637 (+)
eif2b4 LOC106608321 coding downstream 315904 42329742 ~ 42364354 (+)
LOC110522651 LOC106608319 coding downstream 356982 42370820 ~ 42433129 (+)
si:ch211-278j3.3 LOC106608328 coding downstream 446520 42460358 ~ 42514461 (+)
si:dkey-71h2.2 LOC104922452 coding downstream 507948 42521786 ~ 42630516 (+)
G352988 NA non-coding upstream 46276 41966642 ~ 41966841 (+)
G352986 NA non-coding upstream 58019 41954758 ~ 41955098 (+)
G352985 NA non-coding upstream 63479 41949432 ~ 41949638 (+)
G352982 NA non-coding upstream 68393 41944522 ~ 41944724 (+)
G352981 NA non-coding upstream 70317 41942545 ~ 41942800 (+)
G353015 NA non-coding downstream 43104 42056942 ~ 42057601 (+)
G353122 NA non-coding downstream 104259 42118097 ~ 42119525 (+)
G353123 NA non-coding downstream 104555 42118393 ~ 42119155 (+)
G353127 NA non-coding downstream 114583 42128421 ~ 42129610 (+)
G353138 NA non-coding downstream 131408 42145246 ~ 42173670 (+)
G352477 NA other upstream 646510 41366201 ~ 41366607 (+)
G352341 NA other upstream 799168 41211113 ~ 41214206 (+)
G352340 NA other upstream 802119 41210247 ~ 41210998 (+)
G352136 LOC106608303 other upstream 1022612 40990159 ~ 40990505 (+)
G351441 NA other upstream 1876344 40134687 ~ 40136773 (+)
G353125 NA other downstream 110838 42124676 ~ 42125759 (+)
G353328 LOC106608329 other downstream 428917 42442755 ~ 42443381 (+)
G353339 NA other downstream 437194 42451032 ~ 42451409 (+)
G353820 NA other downstream 897048 42910886 ~ 42912213 (+)

Expression


Co-expression Network