G353138


Basic Information

Item Value
gene id G353138
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 42145246 ~ 42173670 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU399937
tgctctctctaattctctctttctttctctctctcggaggacctgagccctaggaccatgcctcaggactacctgacatgatgactccttcctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgccttattattattggaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttaaaatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggtttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU399937 True 383 lncRNA 0.50 2 42145246 42173670

Neighbor

gene id symbol gene type direction distance location
LOC110522644 ptk2b coding upstream 210666 41884265 ~ 41934580 (+)
LOC110522643 LOC106608291 coding upstream 463300 41676261 ~ 41681946 (+)
LOC110522642 LOC106608292 coding upstream 469566 41664602 ~ 41675680 (+)
LOC110522641 LOC106608294 coding upstream 493820 41648792 ~ 41651426 (+)
LOC110522636 LOC106608297 coding upstream 699978 41426880 ~ 41445268 (+)
LOC118964483 NA coding downstream 145731 42319401 ~ 42328637 (+)
eif2b4 LOC106608321 coding downstream 156072 42329742 ~ 42364354 (+)
LOC110522651 LOC106608319 coding downstream 197150 42370820 ~ 42433129 (+)
si:ch211-278j3.3 LOC106608328 coding downstream 286688 42460358 ~ 42514461 (+)
si:dkey-71h2.2 LOC104922452 coding downstream 348116 42521786 ~ 42630516 (+)
G353127 NA non-coding upstream 15636 42128421 ~ 42129610 (+)
G353122 NA non-coding upstream 25721 42118097 ~ 42119525 (+)
G353123 NA non-coding upstream 26091 42118393 ~ 42119155 (+)
G353015 NA non-coding upstream 87645 42056942 ~ 42057601 (+)
G352991 NA non-coding upstream 113312 41971393 ~ 42031934 (+)
G353244 NA non-coding downstream 41921 42215591 ~ 42216426 (+)
G353246 NA non-coding downstream 73861 42247531 ~ 42247820 (+)
G353247 NA non-coding downstream 74904 42248574 ~ 42249678 (+)
G353255 NA non-coding downstream 111183 42284853 ~ 42285531 (+)
G353257 NA non-coding downstream 115105 42288775 ~ 42289729 (+)
G353125 NA other upstream 19487 42124676 ~ 42125759 (+)
G352477 NA other upstream 778639 41366201 ~ 41366607 (+)
G352341 NA other upstream 931297 41211113 ~ 41214206 (+)
G352340 NA other upstream 934248 41210247 ~ 41210998 (+)
G352136 LOC106608303 other upstream 1154741 40990159 ~ 40990505 (+)
G353328 LOC106608329 other downstream 269085 42442755 ~ 42443381 (+)
G353339 NA other downstream 277362 42451032 ~ 42451409 (+)
G353820 NA other downstream 737216 42910886 ~ 42912213 (+)
sh3bgrl2 LOC106608335 other downstream 1080233 43253892 ~ 43279017 (+)

Expression


Co-expression Network