G353255


Basic Information

Item Value
gene id G353255
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 42284853 ~ 42285531 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU400066
aaattatggtggaaaataagtatttgttcaatAACAaaggtttatctcaatactttgttatatagcctttgttggcaatgacagaagtcaaacgttttctgtaagtcttcacaaggttttcacacactgttgctggtattttggcccattcctccatgcagatctcctctagagcagagcagtgatgttttggggctgttgctaggcaacgcggacgtcgtcgatgcacttcttaatgaagccggtgactgatgtggtaaacttcTCAATCACTAGGCGCGTCGCCTCTGGataagcattttcttgtttggttATGGCCCTATACAGGTCTATgcgtgcggtcttagtgccagcatcggtttagtggtggtaaatagacagctatgaaaaatatagacgAAAACTCTCTTACCATAGTATGGTCTTAGCTTATCGTGAGGCATTTtaactcaggcgagcagaacTTTGAGACTTCCTGATATTAAAGATCAGGCATCAgttgttgttaacaaagagaaaCACACcttccccgtgtgtgtgtgtgtgtgtgtgtgtgataACAACTTAACTGAGCTGTGACTTCCCTCTTGTGGACATAATAGTGAACATCTTACTCTAAAAAAATCAAGTGTGAACACAATTCAGATTCACCCTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU400066 True 655 lncRNA 0.42 2 42284853 42285531

Neighbor

gene id symbol gene type direction distance location
LOC110522644 ptk2b coding upstream 350273 41884265 ~ 41934580 (+)
LOC110522643 LOC106608291 coding upstream 602907 41676261 ~ 41681946 (+)
LOC110522642 LOC106608292 coding upstream 609173 41664602 ~ 41675680 (+)
LOC110522641 LOC106608294 coding upstream 633427 41648792 ~ 41651426 (+)
LOC110522636 LOC106608297 coding upstream 839585 41426880 ~ 41445268 (+)
LOC118964483 NA coding downstream 33870 42319401 ~ 42328637 (+)
eif2b4 LOC106608321 coding downstream 44211 42329742 ~ 42364354 (+)
LOC110522651 LOC106608319 coding downstream 85289 42370820 ~ 42433129 (+)
si:ch211-278j3.3 LOC106608328 coding downstream 174827 42460358 ~ 42514461 (+)
si:dkey-71h2.2 LOC104922452 coding downstream 236255 42521786 ~ 42630516 (+)
G353247 NA non-coding upstream 35175 42248574 ~ 42249678 (+)
G353246 NA non-coding upstream 37033 42247531 ~ 42247820 (+)
G353244 NA non-coding upstream 68427 42215591 ~ 42216426 (+)
G353138 NA non-coding upstream 111183 42145246 ~ 42173670 (+)
G353127 NA non-coding upstream 155243 42128421 ~ 42129610 (+)
G353257 NA non-coding downstream 3244 42288775 ~ 42289729 (+)
G353284 NA non-coding downstream 48105 42333636 ~ 42335366 (+)
G353293 NA non-coding downstream 82224 42367755 ~ 42370650 (+)
G353312 NA non-coding downstream 94635 42380166 ~ 42380846 (+)
G353315 NA non-coding downstream 102435 42387966 ~ 42389462 (+)
G353125 NA other upstream 159094 42124676 ~ 42125759 (+)
G352477 NA other upstream 918246 41366201 ~ 41366607 (+)
G352341 NA other upstream 1070904 41211113 ~ 41214206 (+)
G352340 NA other upstream 1073855 41210247 ~ 41210998 (+)
G352136 LOC106608303 other upstream 1294348 40990159 ~ 40990505 (+)
G353328 LOC106608329 other downstream 157224 42442755 ~ 42443381 (+)
G353339 NA other downstream 165501 42451032 ~ 42451409 (+)
G353820 NA other downstream 625355 42910886 ~ 42912213 (+)
sh3bgrl2 LOC106608335 other downstream 968372 43253892 ~ 43279017 (+)

Expression


Co-expression Network