G353312


Basic Information

Item Value
gene id G353312
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 42380166 ~ 42380846 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU400151
GAACAGACTGGCAGATAAACAGACGGAATCTTATGGTAATTAGTTTGCAGGCTACAGTCTAGTTTGCAGGCTACAGTCTAGTTTGCAGGCTATAGTTTTTATAATTTAGTCTAGTTTACAGTCTGGTCTTTAGTTTAGTCTGTAGTTTATAGTGTAGTTTATAGTCTGCAGTCTATAGTTTACAGTCTATAATGTGGTTTACAGTGTAGTCTATAGTTTAGTCTGTAGTTTATAGTGTAGTTTATAGTCTGCAGTCTATAGTTTACAGTCTATAATGTGGTTTACAGTCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU400151 True 292 lncRNA 0.35 3 42380166 42380846

Neighbor

gene id symbol gene type direction distance location
eif2b4 LOC106608321 coding upstream 15812 42329742 ~ 42364354 (+)
LOC118964483 NA coding upstream 53185 42319401 ~ 42328637 (+)
LOC110522644 ptk2b coding upstream 445586 41884265 ~ 41934580 (+)
LOC110522643 LOC106608291 coding upstream 698220 41676261 ~ 41681946 (+)
LOC110522642 LOC106608292 coding upstream 704486 41664602 ~ 41675680 (+)
si:ch211-278j3.3 LOC106608328 coding downstream 79512 42460358 ~ 42514461 (+)
si:dkey-71h2.2 LOC104922452 coding downstream 140940 42521786 ~ 42630516 (+)
sh3bgrl2 LOC106608335 coding downstream 873046 43253892 ~ 43279017 (+)
rps12 rps12 coding downstream 905806 43286652 ~ 43291268 (+)
LOC118964509 NA coding downstream 906336 43287182 ~ 43287259 (+)
G353293 NA non-coding upstream 9516 42367755 ~ 42370650 (+)
G353284 NA non-coding upstream 44800 42333636 ~ 42335366 (+)
G353257 NA non-coding upstream 90437 42288775 ~ 42289729 (+)
G353255 NA non-coding upstream 94635 42284853 ~ 42285531 (+)
G353247 NA non-coding upstream 130488 42248574 ~ 42249678 (+)
G353315 NA non-coding downstream 7120 42387966 ~ 42389462 (+)
G353318 NA non-coding downstream 22477 42403323 ~ 42404961 (+)
G353329 NA non-coding downstream 41909 42422755 ~ 42425412 (+)
G353334 LOC106608329 non-coding downstream 62928 42443774 ~ 42444339 (+)
G353336 NA non-coding downstream 65117 42445963 ~ 42446188 (+)
G353125 NA other upstream 254407 42124676 ~ 42125759 (+)
G352477 NA other upstream 1013559 41366201 ~ 41366607 (+)
G352341 NA other upstream 1166217 41211113 ~ 41214206 (+)
G352340 NA other upstream 1169168 41210247 ~ 41210998 (+)
G353328 LOC106608329 other downstream 61909 42442755 ~ 42443381 (+)
G353339 NA other downstream 70186 42451032 ~ 42451409 (+)
G353820 NA other downstream 530040 42910886 ~ 42912213 (+)
G354462 NA other downstream 1230116 43610962 ~ 43611562 (+)

Expression


Co-expression Network