G353336


Basic Information

Item Value
gene id G353336
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 42445963 ~ 42446188 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU400184
ATTTGTACCGTCTTCCTTGAGAGTTTGGGAGCTGGTCTCTCCACCGCCTAGTACGCGTTGTCACAGTCCCTGTCCCTTGAGCTGCTCTCTCCACTGACTAGTACGCGTTGTCACAGTCCCTGCCCCTTGAGCTGCTCTCTCCACCGCTCTCTCCACTGACTAGTACGCGTTGTCACAGTCCCTGTCCCTTGAGCTGCTCTCTCCACTGACTAGTACGCGTTGTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU400184 True 226 lncRNA 0.56 1 42445963 42446188

Neighbor

gene id symbol gene type direction distance location
LOC110522651 LOC106608319 coding upstream 12834 42370820 ~ 42433129 (+)
eif2b4 LOC106608321 coding upstream 81609 42329742 ~ 42364354 (+)
LOC118964483 NA coding upstream 118982 42319401 ~ 42328637 (+)
LOC110522644 ptk2b coding upstream 511383 41884265 ~ 41934580 (+)
LOC110522643 LOC106608291 coding upstream 764017 41676261 ~ 41681946 (+)
si:ch211-278j3.3 LOC106608328 coding downstream 14170 42460358 ~ 42514461 (+)
si:dkey-71h2.2 LOC104922452 coding downstream 75598 42521786 ~ 42630516 (+)
sh3bgrl2 LOC106608335 coding downstream 807704 43253892 ~ 43279017 (+)
rps12 rps12 coding downstream 840464 43286652 ~ 43291268 (+)
LOC118964509 NA coding downstream 840994 43287182 ~ 43287259 (+)
G353334 LOC106608329 non-coding upstream 1624 42443774 ~ 42444339 (+)
G353329 NA non-coding upstream 20551 42422755 ~ 42425412 (+)
G353318 NA non-coding upstream 41002 42403323 ~ 42404961 (+)
G353315 NA non-coding upstream 56501 42387966 ~ 42389462 (+)
G353312 NA non-coding upstream 65117 42380166 ~ 42380846 (+)
G353337 NA non-coding downstream 1674 42447862 ~ 42448095 (+)
G353340 NA non-coding downstream 5627 42451815 ~ 42452065 (+)
G353343 NA non-coding downstream 8753 42454941 ~ 42455543 (+)
G353295 NA non-coding downstream 9507 42455695 ~ 42457805 (+)
G353328 LOC106608329 other upstream 2582 42442755 ~ 42443381 (+)
G353125 NA other upstream 320204 42124676 ~ 42125759 (+)
G352477 NA other upstream 1079356 41366201 ~ 41366607 (+)
G352341 NA other upstream 1232014 41211113 ~ 41214206 (+)
G353339 NA other downstream 4844 42451032 ~ 42451409 (+)
G353820 NA other downstream 464698 42910886 ~ 42912213 (+)
G354462 NA other downstream 1164774 43610962 ~ 43611562 (+)
G354630 NA other downstream 1543935 43990123 ~ 43990639 (+)

Expression


Co-expression Network