Gene
RNA
| Item | Value |
|---|---|
| gene id | G353295 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 42455695 ~ 42457805 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU400134 | True | 402 | lncRNA | 0.42 | 3 | 42455695 | 42457805 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522651 | LOC106608319 | coding | upstream | 22566 | 42370820 ~ 42433129 (+) |
| eif2b4 | LOC106608321 | coding | upstream | 91341 | 42329742 ~ 42364354 (+) |
| LOC118964483 | NA | coding | upstream | 128714 | 42319401 ~ 42328637 (+) |
| LOC110522644 | ptk2b | coding | upstream | 521115 | 41884265 ~ 41934580 (+) |
| LOC110522643 | LOC106608291 | coding | upstream | 773749 | 41676261 ~ 41681946 (+) |
| si:ch211-278j3.3 | LOC106608328 | coding | downstream | 2553 | 42460358 ~ 42514461 (+) |
| si:dkey-71h2.2 | LOC104922452 | coding | downstream | 63981 | 42521786 ~ 42630516 (+) |
| sh3bgrl2 | LOC106608335 | coding | downstream | 796087 | 43253892 ~ 43279017 (+) |
| rps12 | rps12 | coding | downstream | 828847 | 43286652 ~ 43291268 (+) |
| LOC118964509 | NA | coding | downstream | 829377 | 43287182 ~ 43287259 (+) |
| G353343 | NA | non-coding | upstream | 152 | 42454941 ~ 42455543 (+) |
| G353340 | NA | non-coding | upstream | 3630 | 42451815 ~ 42452065 (+) |
| G353337 | NA | non-coding | upstream | 7600 | 42447862 ~ 42448095 (+) |
| G353336 | NA | non-coding | upstream | 9507 | 42445963 ~ 42446188 (+) |
| G353334 | LOC106608329 | non-coding | upstream | 11356 | 42443774 ~ 42444339 (+) |
| G353299 | NA | non-coding | downstream | 15731 | 42473536 ~ 42473985 (+) |
| G353348 | NA | non-coding | downstream | 28691 | 42486496 ~ 42486736 (+) |
| G353303 | NA | non-coding | downstream | 36745 | 42494550 ~ 42495193 (+) |
| G353308 | NA | non-coding | downstream | 44952 | 42502757 ~ 42504114 (+) |
| G353339 | NA | other | upstream | 4286 | 42451032 ~ 42451409 (+) |
| G353328 | LOC106608329 | other | upstream | 12314 | 42442755 ~ 42443381 (+) |
| G353125 | NA | other | upstream | 329936 | 42124676 ~ 42125759 (+) |
| G352477 | NA | other | upstream | 1089088 | 41366201 ~ 41366607 (+) |
| G353820 | NA | other | downstream | 453081 | 42910886 ~ 42912213 (+) |
| G354462 | NA | other | downstream | 1153157 | 43610962 ~ 43611562 (+) |
| G354630 | NA | other | downstream | 1532318 | 43990123 ~ 43990639 (+) |
| myb | myb | other | downstream | 1651274 | 44084616 ~ 44110268 (+) |
