G353355


Basic Information

Item Value
gene id G353355
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 42521118 ~ 42521317 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU400206
gactaGACTGACGAATCGAGGCAATTAACTATCTAGTGCTAGCTAAATATAGAAATAcataaattggctacatttctttaaatgcaCTATTCTGTGAAATGTCTTGTgtaagttttaaattgacacaatacctgttagcaaaggtgtcagctagagatgacgtgcaggagcttgcagggatttgtagttttgcatgatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU400206 True 200 lncRNA 0.37 1 42521118 42521317

Neighbor

gene id symbol gene type direction distance location
si:ch211-278j3.3 LOC106608328 coding upstream 6657 42460358 ~ 42514461 (+)
LOC110522651 LOC106608319 coding upstream 87989 42370820 ~ 42433129 (+)
eif2b4 LOC106608321 coding upstream 156764 42329742 ~ 42364354 (+)
LOC118964483 NA coding upstream 194137 42319401 ~ 42328637 (+)
LOC110522644 ptk2b coding upstream 586538 41884265 ~ 41934580 (+)
si:dkey-71h2.2 LOC104922452 coding downstream 469 42521786 ~ 42630516 (+)
sh3bgrl2 LOC106608335 coding downstream 732575 43253892 ~ 43279017 (+)
rps12 rps12 coding downstream 765335 43286652 ~ 43291268 (+)
LOC118964509 NA coding downstream 765865 43287182 ~ 43287259 (+)
tbpl1 tbpl1 coding downstream 1182702 43704019 ~ 43722541 (+)
G353308 NA non-coding upstream 17004 42502757 ~ 42504114 (+)
G353303 NA non-coding upstream 25925 42494550 ~ 42495193 (+)
G353348 NA non-coding upstream 34382 42486496 ~ 42486736 (+)
G353299 NA non-coding upstream 47133 42473536 ~ 42473985 (+)
G353375 NA non-coding downstream 50358 42571675 ~ 42572122 (+)
G353383 NA non-coding downstream 64351 42585668 ~ 42653695 (+)
G353398 NA non-coding downstream 110966 42632283 ~ 42633512 (+)
G353399 NA non-coding downstream 113315 42634632 ~ 42642233 (+)
G353412 NA non-coding downstream 156827 42678144 ~ 42681176 (+)
G353339 NA other upstream 69709 42451032 ~ 42451409 (+)
G353328 LOC106608329 other upstream 77737 42442755 ~ 42443381 (+)
G353125 NA other upstream 395359 42124676 ~ 42125759 (+)
G352477 NA other upstream 1154511 41366201 ~ 41366607 (+)
G353820 NA other downstream 389569 42910886 ~ 42912213 (+)
G354462 NA other downstream 1089645 43610962 ~ 43611562 (+)
G354630 NA other downstream 1468806 43990123 ~ 43990639 (+)
myb myb other downstream 1587762 44084616 ~ 44110268 (+)

Expression


Co-expression Network