G353809


Basic Information

Item Value
gene id G353809
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 42892801 ~ 42893205 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU400767
ATAAAATAAGTGGACTTCAGGATAATTTGGTATTGACACTGTATTACTATTACTaaacagagagagcTGAGAGTATTACTAAACTGTGAGAGTATTACTAAACTGAGAAAGTATTGCTAAACTGTGAGAGTATTACTAAACTGTGAGAGTATTACTAAACTGTGAGAGTATTACTAAACTGAGAAAGTATTGCTAAACTGAGAGTATTGCAATTCACAATATCAGACAGGGAGATGCTGTAGCAGTAACAGTCGACAACAATTCAAAGATGTCTGCCTGCGtatcacacactcacagacacacacacacactcccagacacacacacacactcacagacacacacagacacacgcacacacacacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU400767 True 367 lncRNA 0.38 2 42892801 42893205

Neighbor

gene id symbol gene type direction distance location
si:dkey-71h2.2 LOC104922452 coding upstream 262285 42521786 ~ 42630516 (+)
si:ch211-278j3.3 LOC106608328 coding upstream 378340 42460358 ~ 42514461 (+)
LOC110522651 LOC106608319 coding upstream 459672 42370820 ~ 42433129 (+)
eif2b4 LOC106608321 coding upstream 528447 42329742 ~ 42364354 (+)
LOC118964483 NA coding upstream 565820 42319401 ~ 42328637 (+)
sh3bgrl2 LOC106608335 coding downstream 360687 43253892 ~ 43279017 (+)
rps12 rps12 coding downstream 393447 43286652 ~ 43291268 (+)
LOC118964509 NA coding downstream 393977 43287182 ~ 43287259 (+)
tbpl1 tbpl1 coding downstream 810814 43704019 ~ 43722541 (+)
slc2a12 slc2a12 coding downstream 847058 43740263 ~ 43768983 (+)
G353803 NA non-coding upstream 10078 42882432 ~ 42882723 (+)
G353799 NA non-coding upstream 17005 42875245 ~ 42875796 (+)
G353780 NA non-coding upstream 43927 42846411 ~ 42848874 (+)
G353752 LOC106608341 non-coding upstream 69528 42796615 ~ 42823273 (+)
G353441 NA non-coding upstream 143287 42748460 ~ 42749514 (+)
G353814 NA non-coding downstream 14829 42908034 ~ 42909056 (+)
G353818 NA non-coding downstream 16671 42909876 ~ 42910184 (+)
G353819 NA non-coding downstream 17355 42910560 ~ 42910838 (+)
G353820 NA non-coding downstream 18496 42910886 ~ 42912213 (+)
G353828 NA non-coding downstream 30037 42923242 ~ 42923550 (+)
G353339 NA other upstream 441392 42451032 ~ 42451409 (+)
G353328 LOC106608329 other upstream 449420 42442755 ~ 42443381 (+)
G353125 NA other upstream 767042 42124676 ~ 42125759 (+)
G352477 NA other upstream 1526194 41366201 ~ 41366607 (+)
G354462 NA other downstream 717757 43610962 ~ 43611562 (+)
G354630 NA other downstream 1096918 43990123 ~ 43990639 (+)
myb myb other downstream 1215874 44084616 ~ 44110268 (+)

Expression


Co-expression Network