G353819


Basic Information

Item Value
gene id G353819
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 42910560 ~ 42910838 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU400783
GCCGACCCAGCCAACCCCAAACATCCTGATACTCAGGTCTTATCAGTCAGGAAACACCGCTCCGCAGTCACATCCTCTTCACAGGAGCACGACTCAGCTGGtcccaaaaaaacaacaacgtaGGAAGACCCGCCGAGCTAAAGTGCCAGACTTCAGGATTTGTCAAAAGCCCCCTGAATTCCTTTTAtcataaagagagagaagaattCAGGGGGGGAAACAAAAGCAAAGGGCAGAGAAATGAGGAACGTTTTAGAAACAGTCAATGATCAGAGAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU400783 True 279 lncRNA 0.47 1 42910560 42910838

Neighbor

gene id symbol gene type direction distance location
si:dkey-71h2.2 LOC104922452 coding upstream 280044 42521786 ~ 42630516 (+)
si:ch211-278j3.3 LOC106608328 coding upstream 396099 42460358 ~ 42514461 (+)
LOC110522651 LOC106608319 coding upstream 477431 42370820 ~ 42433129 (+)
eif2b4 LOC106608321 coding upstream 546206 42329742 ~ 42364354 (+)
LOC118964483 NA coding upstream 583579 42319401 ~ 42328637 (+)
sh3bgrl2 LOC106608335 coding downstream 343054 43253892 ~ 43279017 (+)
rps12 rps12 coding downstream 375814 43286652 ~ 43291268 (+)
LOC118964509 NA coding downstream 376344 43287182 ~ 43287259 (+)
tbpl1 tbpl1 coding downstream 793181 43704019 ~ 43722541 (+)
slc2a12 slc2a12 coding downstream 829425 43740263 ~ 43768983 (+)
G353818 NA non-coding upstream 376 42909876 ~ 42910184 (+)
G353814 NA non-coding upstream 1504 42908034 ~ 42909056 (+)
G353809 NA non-coding upstream 17355 42892801 ~ 42893205 (+)
G353803 NA non-coding upstream 27837 42882432 ~ 42882723 (+)
G353799 NA non-coding upstream 34764 42875245 ~ 42875796 (+)
G353820 NA non-coding downstream 863 42910886 ~ 42912213 (+)
G353828 NA non-coding downstream 12404 42923242 ~ 42923550 (+)
G353829 NA non-coding downstream 19295 42930133 ~ 42930381 (+)
G353830 NA non-coding downstream 19559 42930397 ~ 42930658 (+)
G353831 NA non-coding downstream 20040 42930878 ~ 42931492 (+)
G353339 NA other upstream 459151 42451032 ~ 42451409 (+)
G353328 LOC106608329 other upstream 467179 42442755 ~ 42443381 (+)
G353125 NA other upstream 784801 42124676 ~ 42125759 (+)
G352477 NA other upstream 1543953 41366201 ~ 41366607 (+)
G354462 NA other downstream 700124 43610962 ~ 43611562 (+)
G354630 NA other downstream 1079285 43990123 ~ 43990639 (+)
myb myb other downstream 1198241 44084616 ~ 44110268 (+)

Expression


Co-expression Network