G353829


Basic Information

Item Value
gene id G353829
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 42930133 ~ 42930381 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU400801
tgtatatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagagataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaactttattaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU400801 True 249 lncRNA 0.37 1 42930133 42930381

Neighbor

gene id symbol gene type direction distance location
si:dkey-71h2.2 LOC104922452 coding upstream 299617 42521786 ~ 42630516 (+)
si:ch211-278j3.3 LOC106608328 coding upstream 415672 42460358 ~ 42514461 (+)
LOC110522651 LOC106608319 coding upstream 497004 42370820 ~ 42433129 (+)
eif2b4 LOC106608321 coding upstream 565779 42329742 ~ 42364354 (+)
LOC118964483 NA coding upstream 603152 42319401 ~ 42328637 (+)
sh3bgrl2 LOC106608335 coding downstream 323511 43253892 ~ 43279017 (+)
rps12 rps12 coding downstream 356271 43286652 ~ 43291268 (+)
LOC118964509 NA coding downstream 356801 43287182 ~ 43287259 (+)
tbpl1 tbpl1 coding downstream 773638 43704019 ~ 43722541 (+)
slc2a12 slc2a12 coding downstream 809882 43740263 ~ 43768983 (+)
G353828 NA non-coding upstream 6583 42923242 ~ 42923550 (+)
G353820 NA non-coding upstream 17920 42910886 ~ 42912213 (+)
G353819 NA non-coding upstream 19295 42910560 ~ 42910838 (+)
G353818 NA non-coding upstream 19949 42909876 ~ 42910184 (+)
G353814 NA non-coding upstream 21077 42908034 ~ 42909056 (+)
G353830 NA non-coding downstream 16 42930397 ~ 42930658 (+)
G353831 NA non-coding downstream 497 42930878 ~ 42931492 (+)
G353832 NA non-coding downstream 1394 42931775 ~ 42932127 (+)
G353833 NA non-coding downstream 3636 42934017 ~ 42934458 (+)
G353834 NA non-coding downstream 4415 42934796 ~ 42935505 (+)
G353339 NA other upstream 478724 42451032 ~ 42451409 (+)
G353328 LOC106608329 other upstream 486752 42442755 ~ 42443381 (+)
G353125 NA other upstream 804374 42124676 ~ 42125759 (+)
G354462 NA other downstream 680581 43610962 ~ 43611562 (+)
G354630 NA other downstream 1059742 43990123 ~ 43990639 (+)
myb myb other downstream 1178698 44084616 ~ 44110268 (+)
G354819 NA other downstream 1529312 44459693 ~ 44461991 (+)

Expression


Co-expression Network