G353856


Basic Information

Item Value
gene id G353856
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 42992134 ~ 42992656 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU400839
tctatatgtagtgtgattctatatgcagtgtgattctatatgcagtgtgattctatatgcagtgtgattctatatgcagtgtgattctatatgcagtgtgattctcatgattctatatgtagtgtgattctatatgcagtgtgattctatatgtagtgtgattctatatgtagtgtgattctatatgcagtgtgattctcatgattctatatgcagtgtgattctatatgtagtgtgattctatatgtagtgtgattctatatgcagtgtgattctcatgattctatatgtagtgtgattctatatgtagtgtgattctcatgattctatatgtagtgtgattctatatgtagtgtgattctatatgcagtgtgattctcatgattctatatgcagtgtgattc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562289

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU400839 True 404 lncRNA 0.33 2 42992134 42992656

Neighbor

gene id symbol gene type direction distance location
si:dkey-71h2.2 LOC104922452 coding upstream 361618 42521786 ~ 42630516 (+)
si:ch211-278j3.3 LOC106608328 coding upstream 477673 42460358 ~ 42514461 (+)
LOC110522651 LOC106608319 coding upstream 559005 42370820 ~ 42433129 (+)
eif2b4 LOC106608321 coding upstream 627780 42329742 ~ 42364354 (+)
LOC118964483 NA coding upstream 665153 42319401 ~ 42328637 (+)
sh3bgrl2 LOC106608335 coding downstream 261236 43253892 ~ 43279017 (+)
rps12 rps12 coding downstream 293996 43286652 ~ 43291268 (+)
LOC118964509 NA coding downstream 294526 43287182 ~ 43287259 (+)
tbpl1 tbpl1 coding downstream 711363 43704019 ~ 43722541 (+)
slc2a12 slc2a12 coding downstream 747607 43740263 ~ 43768983 (+)
G353835 pinx1 non-coding upstream 52277 42937597 ~ 42939857 (+)
G353834 NA non-coding upstream 56629 42934796 ~ 42935505 (+)
G353833 NA non-coding upstream 57676 42934017 ~ 42934458 (+)
G353832 NA non-coding upstream 60007 42931775 ~ 42932127 (+)
G353831 NA non-coding upstream 60642 42930878 ~ 42931492 (+)
G353862 NA non-coding downstream 18671 43011327 ~ 43011792 (+)
G353864 NA non-coding downstream 32672 43025328 ~ 43025859 (+)
G353894 NA non-coding downstream 82496 43075152 ~ 43079182 (+)
G353899 NA non-coding downstream 93118 43085774 ~ 43086438 (+)
G353906 NA non-coding downstream 114003 43106659 ~ 43107883 (+)
G353820 NA other upstream 79957 42910886 ~ 42912213 (+)
G353339 NA other upstream 540725 42451032 ~ 42451409 (+)
G353328 LOC106608329 other upstream 548753 42442755 ~ 42443381 (+)
G353125 NA other upstream 866375 42124676 ~ 42125759 (+)
G354462 NA other downstream 618306 43610962 ~ 43611562 (+)
G354630 NA other downstream 997467 43990123 ~ 43990639 (+)
myb myb other downstream 1116423 44084616 ~ 44110268 (+)
G354819 NA other downstream 1467037 44459693 ~ 44461991 (+)

Expression


Co-expression Network