G353894


Basic Information

Item Value
gene id G353894
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 43075152 ~ 43079182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU400905
gcctggtatggttctcaatcagaggcagctgtctatcgttgtccctgattgagaaccatacttaggtagcctggttgtccctgattgagaaccatacttaggcagcctggttgtccctgattgagaaccatacttaggcagcctggttgtccctgattgagaaccatacttaggcagcctggttgtccctgattgagaaccatacttaggtagcctggttgtccctgattgagaaccatacttaggcagcctggttgtccctgattgagaaccatacttaggtagcctggttgtccctgattgagaaccatacttaggcagcctggttg

Function

NR:

description
PREDICTED: zinc finger protein 318

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU400905 True 329 lncRNA 0.49 2 43075152 43079182

Neighbor

gene id symbol gene type direction distance location
si:dkey-71h2.2 LOC104922452 coding upstream 444636 42521786 ~ 42630516 (+)
si:ch211-278j3.3 LOC106608328 coding upstream 560691 42460358 ~ 42514461 (+)
LOC110522651 LOC106608319 coding upstream 642023 42370820 ~ 42433129 (+)
eif2b4 LOC106608321 coding upstream 710798 42329742 ~ 42364354 (+)
LOC118964483 NA coding upstream 748171 42319401 ~ 42328637 (+)
sh3bgrl2 LOC106608335 coding downstream 174710 43253892 ~ 43279017 (+)
rps12 rps12 coding downstream 207470 43286652 ~ 43291268 (+)
LOC118964509 NA coding downstream 208000 43287182 ~ 43287259 (+)
tbpl1 tbpl1 coding downstream 624837 43704019 ~ 43722541 (+)
slc2a12 slc2a12 coding downstream 661081 43740263 ~ 43768983 (+)
G353864 NA non-coding upstream 49293 43025328 ~ 43025859 (+)
G353862 NA non-coding upstream 63360 43011327 ~ 43011792 (+)
G353856 NA non-coding upstream 82496 42992134 ~ 42992656 (+)
G353835 pinx1 non-coding upstream 135295 42937597 ~ 42939857 (+)
G353834 NA non-coding upstream 139647 42934796 ~ 42935505 (+)
G353899 NA non-coding downstream 6592 43085774 ~ 43086438 (+)
G353906 NA non-coding downstream 27477 43106659 ~ 43107883 (+)
G353908 NA non-coding downstream 33387 43112569 ~ 43112992 (+)
G353926 NA non-coding downstream 80441 43159623 ~ 43159937 (+)
G353943 NA non-coding downstream 124237 43203419 ~ 43203835 (+)
G353820 NA other upstream 162975 42910886 ~ 42912213 (+)
G353339 NA other upstream 623743 42451032 ~ 42451409 (+)
G353328 LOC106608329 other upstream 631771 42442755 ~ 42443381 (+)
G353125 NA other upstream 949393 42124676 ~ 42125759 (+)
G354462 NA other downstream 531780 43610962 ~ 43611562 (+)
G354630 NA other downstream 910941 43990123 ~ 43990639 (+)
myb myb other downstream 1029897 44084616 ~ 44110268 (+)
G354819 NA other downstream 1380511 44459693 ~ 44461991 (+)

Expression


Co-expression Network