G353899


Basic Information

Item Value
gene id G353899
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 43085774 ~ 43086438 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU400910
gcctctgatctggaggactcactaaacagagaacattcctactgcctctgatctggaggactcactaaacagagaacatccctggtcatccctactgcctctgatctggaggactcactaaacagagaacatccctggtcatccatactgcctctgatctggaggactcactaaacagcgaacatccctggtcatccctactgcctctgatctggaggactcactaaacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU400910 True 231 lncRNA 0.50 2 43085774 43086438

Neighbor

gene id symbol gene type direction distance location
si:dkey-71h2.2 LOC104922452 coding upstream 455258 42521786 ~ 42630516 (+)
si:ch211-278j3.3 LOC106608328 coding upstream 571313 42460358 ~ 42514461 (+)
LOC110522651 LOC106608319 coding upstream 652645 42370820 ~ 42433129 (+)
eif2b4 LOC106608321 coding upstream 721420 42329742 ~ 42364354 (+)
LOC118964483 NA coding upstream 758793 42319401 ~ 42328637 (+)
sh3bgrl2 LOC106608335 coding downstream 167454 43253892 ~ 43279017 (+)
rps12 rps12 coding downstream 200214 43286652 ~ 43291268 (+)
LOC118964509 NA coding downstream 200744 43287182 ~ 43287259 (+)
tbpl1 tbpl1 coding downstream 617581 43704019 ~ 43722541 (+)
slc2a12 slc2a12 coding downstream 653825 43740263 ~ 43768983 (+)
G353894 NA non-coding upstream 6592 43075152 ~ 43079182 (+)
G353864 NA non-coding upstream 59915 43025328 ~ 43025859 (+)
G353862 NA non-coding upstream 73982 43011327 ~ 43011792 (+)
G353856 NA non-coding upstream 93118 42992134 ~ 42992656 (+)
G353835 pinx1 non-coding upstream 145917 42937597 ~ 42939857 (+)
G353906 NA non-coding downstream 20221 43106659 ~ 43107883 (+)
G353908 NA non-coding downstream 26131 43112569 ~ 43112992 (+)
G353926 NA non-coding downstream 73185 43159623 ~ 43159937 (+)
G353943 NA non-coding downstream 116981 43203419 ~ 43203835 (+)
G353944 NA non-coding downstream 119126 43205564 ~ 43206081 (+)
G353820 NA other upstream 173597 42910886 ~ 42912213 (+)
G353339 NA other upstream 634365 42451032 ~ 42451409 (+)
G353328 LOC106608329 other upstream 642393 42442755 ~ 42443381 (+)
G353125 NA other upstream 960015 42124676 ~ 42125759 (+)
G354462 NA other downstream 524524 43610962 ~ 43611562 (+)
G354630 NA other downstream 903685 43990123 ~ 43990639 (+)
myb myb other downstream 1022641 44084616 ~ 44110268 (+)
G354819 NA other downstream 1373255 44459693 ~ 44461991 (+)

Expression


Co-expression Network