Gene
RNA
| Item | Value |
|---|---|
| gene id | G353906 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 43106659 ~ 43107883 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU400917 | True | 1080 | lncRNA | 0.47 | 3 | 43106659 | 43107883 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-71h2.2 | LOC104922452 | coding | upstream | 476143 | 42521786 ~ 42630516 (+) |
| si:ch211-278j3.3 | LOC106608328 | coding | upstream | 592198 | 42460358 ~ 42514461 (+) |
| LOC110522651 | LOC106608319 | coding | upstream | 673530 | 42370820 ~ 42433129 (+) |
| eif2b4 | LOC106608321 | coding | upstream | 742305 | 42329742 ~ 42364354 (+) |
| LOC118964483 | NA | coding | upstream | 779678 | 42319401 ~ 42328637 (+) |
| sh3bgrl2 | LOC106608335 | coding | downstream | 146009 | 43253892 ~ 43279017 (+) |
| rps12 | rps12 | coding | downstream | 178769 | 43286652 ~ 43291268 (+) |
| LOC118964509 | NA | coding | downstream | 179299 | 43287182 ~ 43287259 (+) |
| tbpl1 | tbpl1 | coding | downstream | 596136 | 43704019 ~ 43722541 (+) |
| slc2a12 | slc2a12 | coding | downstream | 632380 | 43740263 ~ 43768983 (+) |
| G353899 | NA | non-coding | upstream | 20221 | 43085774 ~ 43086438 (+) |
| G353894 | NA | non-coding | upstream | 27477 | 43075152 ~ 43079182 (+) |
| G353864 | NA | non-coding | upstream | 80800 | 43025328 ~ 43025859 (+) |
| G353862 | NA | non-coding | upstream | 94867 | 43011327 ~ 43011792 (+) |
| G353856 | NA | non-coding | upstream | 114003 | 42992134 ~ 42992656 (+) |
| G353908 | NA | non-coding | downstream | 4686 | 43112569 ~ 43112992 (+) |
| G353926 | NA | non-coding | downstream | 51740 | 43159623 ~ 43159937 (+) |
| G353943 | NA | non-coding | downstream | 95536 | 43203419 ~ 43203835 (+) |
| G353944 | NA | non-coding | downstream | 97681 | 43205564 ~ 43206081 (+) |
| G353950 | NA | non-coding | downstream | 124252 | 43232135 ~ 43232554 (+) |
| G353820 | NA | other | upstream | 194482 | 42910886 ~ 42912213 (+) |
| G353339 | NA | other | upstream | 655250 | 42451032 ~ 42451409 (+) |
| G353328 | LOC106608329 | other | upstream | 663278 | 42442755 ~ 42443381 (+) |
| G353125 | NA | other | upstream | 980900 | 42124676 ~ 42125759 (+) |
| G354462 | NA | other | downstream | 503079 | 43610962 ~ 43611562 (+) |
| G354630 | NA | other | downstream | 882240 | 43990123 ~ 43990639 (+) |
| myb | myb | other | downstream | 1001196 | 44084616 ~ 44110268 (+) |
| G354819 | NA | other | downstream | 1351810 | 44459693 ~ 44461991 (+) |
