Gene
RNA
| Item | Value |
|---|---|
| gene id | G353943 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 43203419 ~ 43203835 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU400960 | True | 271 | lncRNA | 0.54 | 2 | 43203419 | 43203835 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-71h2.2 | LOC104922452 | coding | upstream | 572903 | 42521786 ~ 42630516 (+) |
| si:ch211-278j3.3 | LOC106608328 | coding | upstream | 688958 | 42460358 ~ 42514461 (+) |
| LOC110522651 | LOC106608319 | coding | upstream | 770290 | 42370820 ~ 42433129 (+) |
| eif2b4 | LOC106608321 | coding | upstream | 839065 | 42329742 ~ 42364354 (+) |
| LOC118964483 | NA | coding | upstream | 876438 | 42319401 ~ 42328637 (+) |
| sh3bgrl2 | LOC106608335 | coding | downstream | 50057 | 43253892 ~ 43279017 (+) |
| rps12 | rps12 | coding | downstream | 82817 | 43286652 ~ 43291268 (+) |
| LOC118964509 | NA | coding | downstream | 83347 | 43287182 ~ 43287259 (+) |
| tbpl1 | tbpl1 | coding | downstream | 500184 | 43704019 ~ 43722541 (+) |
| slc2a12 | slc2a12 | coding | downstream | 536428 | 43740263 ~ 43768983 (+) |
| G353926 | NA | non-coding | upstream | 43482 | 43159623 ~ 43159937 (+) |
| G353908 | NA | non-coding | upstream | 90427 | 43112569 ~ 43112992 (+) |
| G353906 | NA | non-coding | upstream | 95536 | 43106659 ~ 43107883 (+) |
| G353899 | NA | non-coding | upstream | 116981 | 43085774 ~ 43086438 (+) |
| G353894 | NA | non-coding | upstream | 124237 | 43075152 ~ 43079182 (+) |
| G353944 | NA | non-coding | downstream | 1729 | 43205564 ~ 43206081 (+) |
| G353950 | NA | non-coding | downstream | 28300 | 43232135 ~ 43232554 (+) |
| G353952 | NA | non-coding | downstream | 42828 | 43246663 ~ 43246903 (+) |
| G353940 | NA | non-coding | downstream | 75971 | 43279806 ~ 43280666 (+) |
| G353963 | NA | non-coding | downstream | 78206 | 43282041 ~ 43283848 (+) |
| G353820 | NA | other | upstream | 291242 | 42910886 ~ 42912213 (+) |
| G353339 | NA | other | upstream | 752010 | 42451032 ~ 42451409 (+) |
| G353328 | LOC106608329 | other | upstream | 760038 | 42442755 ~ 42443381 (+) |
| G353125 | NA | other | upstream | 1077660 | 42124676 ~ 42125759 (+) |
| G354462 | NA | other | downstream | 407127 | 43610962 ~ 43611562 (+) |
| G354630 | NA | other | downstream | 786288 | 43990123 ~ 43990639 (+) |
| myb | myb | other | downstream | 905244 | 44084616 ~ 44110268 (+) |
| G354819 | NA | other | downstream | 1255858 | 44459693 ~ 44461991 (+) |
