G353952


Basic Information

Item Value
gene id G353952
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 43246663 ~ 43246903 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU400977
TTCCTAGtgtcccttatggctctaatctgatagtggtagtgaggtggtagaTTCCTAGTGTCCCTTAtcgctctaatctgatagtggtgttTGGGTGGTAGATTCTTAGTGTCCCTATTAGCTCTAATCTGATAGCGGTGTTTGGGTGGTAGATTCTTAGTGTCCCTATTAGCTCTAATCTGACAGTGGTGTTAGGGTGGTAGATTCCTAGTGTCCCTTATGGctgtaatctgatagtggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU400977 True 241 lncRNA 0.44 1 43246663 43246903

Neighbor

gene id symbol gene type direction distance location
si:dkey-71h2.2 LOC104922452 coding upstream 616147 42521786 ~ 42630516 (+)
si:ch211-278j3.3 LOC106608328 coding upstream 732202 42460358 ~ 42514461 (+)
LOC110522651 LOC106608319 coding upstream 813534 42370820 ~ 42433129 (+)
eif2b4 LOC106608321 coding upstream 882309 42329742 ~ 42364354 (+)
LOC118964483 NA coding upstream 919682 42319401 ~ 42328637 (+)
sh3bgrl2 LOC106608335 coding downstream 6989 43253892 ~ 43279017 (+)
rps12 rps12 coding downstream 39749 43286652 ~ 43291268 (+)
LOC118964509 NA coding downstream 40279 43287182 ~ 43287259 (+)
tbpl1 tbpl1 coding downstream 457116 43704019 ~ 43722541 (+)
slc2a12 slc2a12 coding downstream 493360 43740263 ~ 43768983 (+)
G353950 NA non-coding upstream 14109 43232135 ~ 43232554 (+)
G353944 NA non-coding upstream 40582 43205564 ~ 43206081 (+)
G353943 NA non-coding upstream 42828 43203419 ~ 43203835 (+)
G353926 NA non-coding upstream 86726 43159623 ~ 43159937 (+)
G353908 NA non-coding upstream 133671 43112569 ~ 43112992 (+)
G353940 NA non-coding downstream 32903 43279806 ~ 43280666 (+)
G353963 NA non-coding downstream 35138 43282041 ~ 43283848 (+)
G353968 NA non-coding downstream 47597 43294500 ~ 43294783 (+)
G353969 NA non-coding downstream 48107 43295010 ~ 43295264 (+)
G353970 NA non-coding downstream 52392 43299295 ~ 43300099 (+)
G353820 NA other upstream 334486 42910886 ~ 42912213 (+)
G353339 NA other upstream 795254 42451032 ~ 42451409 (+)
G353328 LOC106608329 other upstream 803282 42442755 ~ 42443381 (+)
G353125 NA other upstream 1120904 42124676 ~ 42125759 (+)
G354462 NA other downstream 364059 43610962 ~ 43611562 (+)
G354630 NA other downstream 743220 43990123 ~ 43990639 (+)
myb myb other downstream 862176 44084616 ~ 44110268 (+)
G354819 NA other downstream 1212790 44459693 ~ 44461991 (+)

Expression


Co-expression Network